RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PET100P0DJ07 73 aa14.22□□□□□ -0.13
TVP23B-202ENST00000476139 C20orf204Q6ZNR8 217 aa14.22□□□□□ -0.13
TVP23B-202ENST00000476139 MKXQ8IYA7 352 aa14.22□□□□□ -0.13
TVP23B-202ENST00000476139 TNRC6AQ8NDV7 1962 aaKnown RBP14.22□□□□□ -0.13
TVP23B-202ENST00000476139 ZNF292O60281 2723 aa14.21□□□□□ -0.13
TVP23B-202ENST00000476139 PJVKQ0ZLH3 352 aa14.21□□□□□ -0.13
TVP23B-202ENST00000476139 TRIB1Q96RU8 372 aa14.21□□□□□ -0.13
TVP23B-202ENST00000476139 PRRX2Q99811 253 aa14.21□□□□□ -0.13
TVP23B-202ENST00000476139 MMP26Q9NRE1 261 aa14.21□□□□□ -0.13
TVP23B-202ENST00000476139 A0A1B0GV50 99 aa14.21□□□□□ -0.14
TVP23B-202ENST00000476139 C9JQL5 133 aa14.21□□□□□ -0.14
TVP23B-202ENST00000476139 SLC33A1O00400 549 aaPredicted RBP14.21□□□□□ -0.14
TVP23B-202ENST00000476139 IGHV1-2P23083 117 aa14.21□□□□□ -0.14
TVP23B-202ENST00000476139 MEX3BQ6ZN04 569 aaKnown RBP14.21□□□□□ -0.14
TVP23B-202ENST00000476139 RDH5Q92781 318 aa14.21□□□□□ -0.14
TVP23B-202ENST00000476139 TP53RKQ96S44 253 aa14.21□□□□□ -0.14
TVP23B-202ENST00000476139 ZFHX2Q9C0A1 2572 aaPredicted RBP14.21□□□□□ -0.14
TVP23B-202ENST00000476139 PURGQ9UJV8 347 aaKnown RBP14.21□□□□□ -0.14
TVP23B-202ENST00000476139 NAPSAO96009 420 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 MBPP02686 304 aaPredicted RBP14.2□□□□□ -0.14
TVP23B-202ENST00000476139 GNRHRP30968 328 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 CD80P33681 288 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 IDH3GP51553 393 aaPredicted RBP14.2□□□□□ -0.14
TVP23B-202ENST00000476139 SMCO1Q147U7 214 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 HERPUD1Q15011 391 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 GALNT14Q96FL9 552 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 AIFM2Q9BRQ8 373 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 GP6Q9HCN6 339 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 Q9N2K0 584 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 ESPL1Q14674 2120 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 PHF1O43189 567 aaPredicted RBP14.2□□□□□ -0.14
TVP23B-202ENST00000476139 AKR1C3P42330 323 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 GLP1RP43220 463 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 ALKBH6Q3KRA9 238 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 ETV3LQ6ZN32 361 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 SAXO1Q8IYX7 474 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 OR52M1Q8NGK5 317 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 MSI2Q96DH6 328 aaKnown RBP14.2□□□□□ -0.14
TVP23B-202ENST00000476139 GMPPAQ96IJ6 420 aaPredicted RBP14.2□□□□□ -0.14
TVP23B-202ENST00000476139 OR2J1Q9GZK6 312 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 DNAJB11Q9UBS4 358 aa14.2□□□□□ -0.14
TVP23B-202ENST00000476139 SVILO95425 2214 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 PCP4L1A6NKN8 68 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 DEDDO75618 318 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 ZNF14P17017 642 aaPredicted RBP14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FHITP49789 147 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 HERV-K104P61576 105 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 TUBD1Q9UJT1 453 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 AMDHD2Q9Y303 409 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 Q6ZRG5 221 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 SUMF2Q8NBJ7 301 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 RCC2Q9P258 522 aaKnown RBP14.19□□□□□ -0.14
TVP23B-202ENST00000476139 IGKV1-6A0A0C4DH72 117 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A10PA6NDY2 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A18PA6NE21 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A16PA6NEW6 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A20PA6NIJ5 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A8PA6NJQ4 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A7PA6NKC0 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A22PA8MWA6 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A12PA8MX19 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A5PA8MXJ8 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A23PA8MXZ1 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 C1QL1O75973 258 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 OR8U9P0C7N5 309 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A15PP0C7V4 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A13PP0C7W8 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A14PP0C7W9 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 FAM90A24PP0C7X0 464 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 SELEP16581 610 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 PMELP40967 661 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 GNG3P63215 75 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 CNEP1R1Q8N9A8 125 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 OR8U1Q8NH10 309 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 SECTM1Q8WVN6 248 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 RSRP1Q9BUV0 290 aa14.19□□□□□ -0.14
TVP23B-202ENST00000476139 AKAP13Q12802 2813 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 CD82P27701 267 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 LIAT1Q6ZQX7 453 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 NANOS1Q8WY41 292 aaKnown RBP14.18□□□□□ -0.14
TVP23B-202ENST00000476139 MPC1Q9Y5U8 109 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 TRAV24A0A0B4J272 114 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 IGKV1D-13A0A0B4J2D9 117 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 RNASEK-C17orf49H0YIS7 233 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 PVALBP20472 110 aaPredicted RBP14.18□□□□□ -0.14
TVP23B-202ENST00000476139 NHLH2Q02577 135 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 TBC1D28Q2M2D7 210 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 SPIN3Q5JUX0 258 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 WDR86Q86TI4 376 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 C18orf12Q96KH6 178 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 SYT3Q9BQG1 590 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 NRIP2Q9BQI9 281 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 OR51I2Q9H344 312 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 CLCF1Q9UBD9 225 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 ZNF175Q9Y473 711 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 RFNGQ9Y644 331 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 ZNF318Q5VUA4 2279 aa14.18□□□□□ -0.14
TVP23B-202ENST00000476139 UCP3P55916 312 aa14.17□□□□□ -0.14
TVP23B-202ENST00000476139 ZNF818PQ6ZRF7 136 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms