RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 BCL2L10Q9HD36 194 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF346Q9UL40 294 aaKnown RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 HS3ST2Q9Y278 367 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 NUP210Q8TEM1 1887 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 TMEM30CPA0ZSE6 113 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 HIST1H1CP16403 213 aaKnown RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 DHRS2Q13268 280 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OR52N5Q8NH56 324 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 STARD4Q96DR4 205 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 RNF2Q99496 336 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 MKRN2OSH3BPM6 223 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 KLKB1P03952 638 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 NPPBP16860 134 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 CDX1P47902 265 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OR1D5P58170 312 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 CD226Q15762 336 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 RPEQ96AT9 228 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 MFNGO00587 321 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 PPM1DO15297 605 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 PPICP45877 212 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 FUT6P51993 359 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 SURF2Q15527 256 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 AWAT1Q58HT5 328 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 NUFIP2Q7Z417 695 aaKnown RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 BPIFA4PQ86YQ2 179 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 MRPL43Q8N983 215 aaKnown RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OR52N4Q8NGI2 321 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 GPBAR1Q8TDU6 330 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 RGP1Q92546 391 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 CYTL1Q9NRR1 136 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 WSB2Q9NYS7 404 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-209ENST00000475639 DAPP1Q9UN19 280 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 R4GMQ9 66 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 SLCO2B1O94956 709 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 DOLPP1Q86YN1 238 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 WDR31Q8NA23 367 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 OXGR1Q96P68 337 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 KCNE3Q9Y6H6 103 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 A0A087WV48 116 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 A0A1W2PNR3 127 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 DNPH1O43598 174 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 SLC37A1P57057 533 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.77
U2AF1-209ENST00000475639 NSUN5P2Q63ZY6 315 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 THSD4Q6ZMP0 1018 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 STAC2Q6ZMT1 411 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 Q8IYB0 196 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 OR1L3Q8NH93 324 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 MOGAT1Q96PD6 335 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 Q9N2K0 584 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 NOTCH3Q9UM47 2321 aa10.21□□□□□ -0.77
U2AF1-209ENST00000475639 A0A096LPE4 126 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 A0A1W2PPZ6 126 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 MOSPD3O75425 235 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 PCP4P48539 62 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 SLC38A11Q08AI6 406 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 BSXQ3C1V8 233 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 OR2A2Q6IF42 318 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 DND1Q8IYX4 353 aaKnown RBP10.21□□□□□ -0.78
U2AF1-209ENST00000475639 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.78
U2AF1-209ENST00000475639 SMOC1Q9H4F8 434 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 FKBP11Q9NYL4 201 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 HCFC2Q9Y5Z7 792 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 PLPP1O14494 284 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 HLA-BQ31612 363 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 FBXO46Q6PJ61 603 aaPredicted RBP10.21□□□□□ -0.78
U2AF1-209ENST00000475639 ADAMTSL4Q6UY14 1074 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 PFN4Q8NHR9 129 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 EXTL1Q92935 676 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 DEFB127Q9H1M4 99 aa10.21□□□□□ -0.78
U2AF1-209ENST00000475639 CREBBPQ92793 2442 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 TRGV8A0A0C4DH27 118 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SLC17A2O00624 439 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 FCGR3AP08637 254 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SPNS3Q6ZMD2 512 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SFTPA2Q8IWL1 248 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SFTPA1Q8IWL2 248 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF296Q8WUU4 475 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 M0R1B8 84 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 TNFRSF10CO14798 259 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 ARG1P05089 322 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 CD99P14209 185 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF25P17030 456 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 TCTAP57738 103 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 RELBQ01201 579 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 NAAAQ02083 359 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 RPL18Q07020 188 aaKnown RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 RIGQ13278 110 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 AGERQ15109 404 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms