RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 SOX8P57073 446 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 LGI3Q8N145 548 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 LRTM2Q8N967 370 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FDCSPQ8NFU4 85 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 ARL11Q969Q4 196 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 USB1Q9BQ65 265 aaKnown RBP12.02□□□□□ -0.48
UBXN11-214ENST00000475591 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.48
UBXN11-214ENST00000475591 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 TMEM218A2RU14 115 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 GPR31O00270 319 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 HSD17B6O14756 317 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 FBXW12Q6X9E4 464 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 DPPA2Q7Z7J5 298 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 LDLRAD3Q86YD5 345 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 CCDC36Q8IYA8 594 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 GAPTQ8N292 157 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 TMEM178AQ8NBL3 297 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
UBXN11-214ENST00000475591 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 TNFSF12O43508 249 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 MED6O75586 246 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 TAGLNQ01995 201 aaKnown RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 GUCA2BQ16661 112 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 P4HA3Q7Z4N8 544 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 WDR86Q86TI4 376 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 CCDC71LQ8N9Z2 235 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 GP6Q9HCN6 339 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 FAM86C1Q9NVL1 165 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 NKX2-6A6NCS4 301 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 DNASE2O00115 360 aaPredicted RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 AGPAT2O15120 278 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 TK1P04183 234 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 SELEP16581 610 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 IGHV1-2P23083 117 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 KCNJ3P48549 501 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 ASCL1P50553 236 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 GNG3P63215 75 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 OR2J1Q9GZK6 312 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
UBXN11-214ENST00000475591 RCL1Q9Y2P8 373 aaKnown RBP12.01□□□□□ -0.49
UBXN11-214ENST00000475591 TAAR5O14804 337 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 UQCC3Q6UW78 93 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 ZNF573Q86YE8 665 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 FAM58AQ8N1B3 248 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 OR51I2Q9H344 312 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 MMP26Q9NRE1 261 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 GLS2Q9UI32 602 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 MPC1Q9Y5U8 109 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 TRDCB7Z8K6 153 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 E5RGE8 158 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 ATG12O94817 140 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 FTH1P19P0C7X4 201 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 ZNF14P17017 642 aaPredicted RBP12□□□□□ -0.49
UBXN11-214ENST00000475591 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
UBXN11-214ENST00000475591 NHLH2Q02577 135 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 Q6ZS49 121 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 PIP4P1Q86T03 277 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 DMBX1Q8NFW5 382 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 UBALD1Q8TB05 177 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 SMIM8Q96KF7 97 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 TRIB1Q96RU8 372 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 NKX6-2Q9C056 277 aaPredicted RBP12□□□□□ -0.49
UBXN11-214ENST00000475591 TMEM222Q9H0R3 208 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 OPA3Q9H6K4 179 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 TREM1Q9NP99 234 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 NSG2Q9Y328 171 aa12□□□□□ -0.49
UBXN11-214ENST00000475591 EP300Q09472 2414 aaPredicted RBP12□□□□□ -0.49
UBXN11-214ENST00000475591 CDRT15L2A8MXV6 281 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 SLC33A1O00400 549 aaPredicted RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 NXPH3O95157 252 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 TBC1D28Q2M2D7 210 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 PUSL1Q8N0Z8 303 aaKnown RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 ZNF565Q8N9K5 539 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 NANOS1Q8WY41 292 aaKnown RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 TSNAXQ99598 290 aaKnown RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 UBE2J1Q9Y385 318 aaPredicted RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 ATP23Q9Y6H3 246 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 OR5B21A6NL26 309 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 SMPD2O60906 423 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 GLAP06280 429 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 ZNF44P15621 663 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 ZNF169Q14929 603 aaPredicted RBP11.99□□□□□ -0.49
UBXN11-214ENST00000475591 PCSK4Q6UW60 755 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 OR4D5Q8NGN0 318 aa11.99□□□□□ -0.49
UBXN11-214ENST00000475591 LILRB1Q8NHL6 650 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms