RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ZNF260Q3ZCT1 412 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 FAM27D1Q5T7N8 215 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 SLC16A12Q6ZSM3 486 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 TGIF2LXQ8IUE1 241 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 GID4Q8IVV7 300 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 RNF152Q8N8N0 203 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 C4orf3Q8WVX3 66 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 OPALINQ96PE5 141 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 LIN7CQ9NUP9 197 aaKnown RBP9.89□□□□□ -0.83
SKA3-206ENST00000475251 DYNC2H1Q8NCM8 4307 aaKnown RBP9.88□□□□□ -0.83
SKA3-206ENST00000475251 LOC107986453A0A1B0GWG9 222 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 METTL15A6NJ78 407 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 NCBP2LA6PVI3 153 aaKnown RBP9.88□□□□□ -0.83
SKA3-206ENST00000475251 B2RBV5 119 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 PRKYO43930 277 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ZNF20P17024 532 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ATF1P18846 271 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 PRKACGP22612 351 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 GLP1RP43220 463 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 GPR12P47775 334 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 SCN1BQ07699 218 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ATXN7L3Q14CW9 347 aaPredicted RBP9.88□□□□□ -0.83
SKA3-206ENST00000475251 PTGES3Q15185 160 aaKnown RBP9.88□□□□□ -0.83
SKA3-206ENST00000475251 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
SKA3-206ENST00000475251 UTS2BQ765I0 119 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 FAM220AQ7Z4H9 259 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ADGRG5Q8IZF4 528 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 HS3ST5Q8IZT8 346 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 OR10A7Q8NGE5 316 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 OR10X1Q8NGY0 326 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 COQ2Q96H96 371 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ABCG5Q9H222 651 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 NCOR1P1Q9H4R4 102 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ING3Q9NXR8 418 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 IDI2-AS1Q9NZ38 188 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 PSG11Q9UQ72 335 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 ARL2BPQ9Y2Y0 163 aa9.88□□□□□ -0.83
SKA3-206ENST00000475251 IGKV1-9A0A0C4DH69 117 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 AQP12BA6NM10 295 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 SLC33A1O00400 549 aaPredicted RBP9.87□□□□□ -0.83
SKA3-206ENST00000475251 DEGS1O15121 323 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 IL1AP01583 271 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 GAPDHP04406 335 aaKnown RBP9.87□□□□□ -0.83
SKA3-206ENST00000475251 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 VDAC1P21796 283 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
SKA3-206ENST00000475251 FHL3Q13643 280 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 EBI3Q14213 229 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 KIAA2026Q5HYC2 2103 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 AADACL4Q5VUY2 407 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 TMEM244Q5VVB8 128 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 AQP12AQ8IXF9 295 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 SAXO1Q8IYX7 474 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 TMEM163Q8TC26 289 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 CANT1Q8WVQ1 401 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 CCDC124Q96CT7 223 aaKnown RBP9.87□□□□□ -0.83
SKA3-206ENST00000475251 NRBF2Q96F24 287 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 BARHL1Q9BZE3 327 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 CALYQ9NYX4 217 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 WARS2Q9UGM6 360 aaKnown RBP9.87□□□□□ -0.83
SKA3-206ENST00000475251 STAB2Q8WWQ8 2551 aa9.87□□□□□ -0.83
SKA3-206ENST00000475251 MEIKINA0A087WXM9 373 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 A0A1W2PQL4 384 aaPredicted RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 HSD17B6O14756 317 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 DBTP11182 482 aaKnown RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 GNG10P50151 68 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 SSX6Q7RTT6 188 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 ZNF429Q86V71 674 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 IZUMO1Q8IYV9 350 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 TCEANCQ8N8B7 351 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OR11H1Q8NG94 326 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OR8H1Q8NGG4 311 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OR51T1Q8NGJ9 327 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OR2T10Q8NGZ9 312 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 ADAT3Q96EY9 351 aaPredicted RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 EAF1Q96JC9 268 aaPredicted RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 TBX5Q99593 518 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 RASL11BQ9BPW5 248 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 OSBPL10Q9BXB5 764 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 PPIL3Q9H2H8 161 aaKnown RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 LINC00574Q9H8X3 128 aa9.86□□□□□ -0.83
SKA3-206ENST00000475251 EPPK1P58107 5090 aaKnown RBP9.86□□□□□ -0.83
SKA3-206ENST00000475251 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 IGHV1-3A0A0C4DH29 117 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 IGKV1-12A0A0C4DH73 117 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 LINC01548A6NM66 108 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 IGKV1D-12P01611 117 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 IGHG4P01861 327 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 ISG15P05161 165 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 CGB3P0DN86 165 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 CGB7P0DN87 165 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
SKA3-206ENST00000475251 ATP6V1E1P36543 226 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 KCNJ3P48549 501 aa9.85□□□□□ -0.83
SKA3-206ENST00000475251 Q6P435 159 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms