RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SLC35E4Q6ICL7 350 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 C5orf17Q8NAS9 161 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 CHD5Q8TDI0 1954 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 POLEQ07864 2286 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 DNPH1O43598 174 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 SLC35B3Q9H1N7 401 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 DOPEY2Q9Y3R5 2298 aa9.66□□□□□ -0.86
VAPB-204ENST00000475243 A0A1B0GTQ1 180 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 PSG6Q00889 435 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 AESQ08117 197 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 LIPT2A6NK58 231 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 MGAT2Q10469 447 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 NTNG2Q96CW9 530 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 TEX50A0A1B0GTY4 177 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
VAPB-204ENST00000475243 TMEM33P57088 247 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 FDX2Q6P4F2 183 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 PTP4A1Q93096 173 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 PCGF1Q9BSM1 259 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 CCL21O00585 134 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 SPCS3P61009 180 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 ZAR1Q86SH2 424 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 OR5R1Q8NH85 324 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.86
VAPB-204ENST00000475243 MAP6Q96JE9 813 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 ASCL3Q9NQ33 180 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 MBD1Q9UIS9 605 aaPredicted RBP9.65□□□□□ -0.86
VAPB-204ENST00000475243 LIPGQ9Y5X9 500 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 ANKRD36A6QL64 1941 aa9.65□□□□□ -0.86
VAPB-204ENST00000475243 INTS1Q8N201 2190 aaKnown RBP9.65□□□□□ -0.87
VAPB-204ENST00000475243 CDRT15L2A8MXV6 281 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 GSTZ1O43708 216 aaPredicted RBP9.65□□□□□ -0.87
VAPB-204ENST00000475243 ORM1P02763 201 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 RPS4Y1P22090 263 aaKnown RBP9.65□□□□□ -0.87
VAPB-204ENST00000475243 BRS3P32247 399 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 ZIC1Q15915 447 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 OR1K1Q8NGR3 316 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 NUBPLQ8TB37 319 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 PAPPAQ13219 1627 aa9.65□□□□□ -0.87
VAPB-204ENST00000475243 FFAR1O14842 300 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 MPV17LQ2QL34 196 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 SLC25A40Q8TBP6 338 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 PRO1933Q9H354 126 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 STARD10Q9Y365 291 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 DOCK7Q96N67 2140 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 CXorf51AA0A1B0GTR3 108 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 GAPTQ8N292 157 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 AMDHD2Q9Y303 409 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 A0A1W2PPE3 182 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 TMEM127O75204 238 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 SNRPCP09234 159 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 PSG5Q15238 335 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 OR4P4Q8NGL7 312 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 WDR34Q96EX3 536 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 NTMQ9P121 344 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 PCDHGA9Q9Y5G4 932 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 ADAD2Q8NCV1 583 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 RPL30P62888 115 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 RNF212Q495C1 297 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 NSUN5P2Q63ZY6 315 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 OR10A7Q8NGE5 316 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 SLC2A9Q9NRM0 540 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 LY86O95711 162 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 NAAAQ02083 359 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 IL13RA2Q14627 380 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 ECSCRQ19T08 205 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 DOCK6Q96HP0 2047 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 J3QR89 54 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 MGPP08493 103 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 INHBBP09529 407 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 SLC6A1P30531 599 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 RBPMS2Q6ZRY4 209 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 ATG4DQ86TL0 474 aaPredicted RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 PLAC1Q9HBJ0 212 aa9.64□□□□□ -0.87
VAPB-204ENST00000475243 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
VAPB-204ENST00000475243 PLXNA1Q9UIW2 1896 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 ARG1P05089 322 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 PRSS1P07477 247 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 PMELP40967 661 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 UQCC3Q6UW78 93 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 SLC7A10Q9NS82 523 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 LAMB2P55268 1798 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 ANKRD20A5PA0PJZ0 165 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 TRAV20A0A0B4J274 112 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 KCNAB3O43448 404 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 TTRP02766 147 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
VAPB-204ENST00000475243 RNF165Q6ZSG1 346 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms