RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 Q9H521 79 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 TAS2R3Q9NYW6 316 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 U3KQK5 164 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 SERPINE3A8MV23 424 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 DENRO43583 198 aaKnown RBP11.08□□□□□ -0.64
CCDC78-209ENST00000474647 SNRNP70P08621 437 aaKnown RBP11.08□□□□□ -0.64
CCDC78-209ENST00000474647 OCM2P0CE71 109 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 OCMP0CE72 109 aaPredicted RBP11.08□□□□□ -0.64
CCDC78-209ENST00000474647 FAM106CPP0CH98 169 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 ZNF44P15621 663 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 HTR1FP30939 366 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 TMED1Q13445 227 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 ATXN7L3Q14CW9 347 aaPredicted RBP11.08□□□□□ -0.64
CCDC78-209ENST00000474647 KRBOX4Q5JUW0 171 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 PP6455Q8WZ26 134 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 RFKQ969G6 155 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 RPEQ96AT9 228 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 SEBOXQ9HB31 216 aaPredicted RBP11.08□□□□□ -0.64
CCDC78-209ENST00000474647 HMG20AQ9NP66 347 aa11.08□□□□□ -0.64
CCDC78-209ENST00000474647 A0A1W2PQL4 384 aaPredicted RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 ODAMA1E959 279 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 METTL15A6NJ78 407 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 IGHV3-7P01780 117 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 UBCP0CG48 685 aaKnown RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 ZNF20P17024 532 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 TMEM11P17152 192 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 CD34P28906 385 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 UTF1Q5T230 341 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 LAIR2Q6ISS4 152 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 LHFPL2Q6ZUX7 228 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 FAM220AQ7Z4H9 259 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 RDH10Q8IZV5 341 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 PRSS35Q8N3Z0 413 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 CCDC54Q8NEL0 328 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 OR10H4Q8NGA5 316 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 OR5D18Q8NGL1 313 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 CORO2AQ92828 525 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 ADAT3Q96EY9 351 aaPredicted RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 CNBD2Q96M20 576 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 OPALINQ96PE5 141 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 NEK6Q9HC98 313 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 ZMAT5Q9UDW3 170 aaKnown RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 WARS2Q9UGM6 360 aaKnown RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 GNG8Q9UK08 70 aa11.07□□□□□ -0.64
CCDC78-209ENST00000474647 AMMECR1Q9Y4X0 333 aaPredicted RBP11.07□□□□□ -0.64
CCDC78-209ENST00000474647 IGKV1-9A0A0C4DH69 117 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 ZNF729A6NN14 1252 aaPredicted RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 OOSP1A8MZH6 123 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 HSPB6O14558 160 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 DBTP11182 482 aaKnown RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 ATF1P18846 271 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 MYCNOSP40205 109 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 GLP1RP43220 463 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 KIR3DL2P43630 455 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 LUMP51884 338 aaPredicted RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 SLC35B1P78383 322 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 PDZK1IP1Q13113 114 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 HNF4GQ14541 408 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 SMN1Q16637 294 aaKnown RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 TP53I3Q53FA7 332 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 OR9G1Q8NH87 305 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 C10orf35Q96D05 121 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 COQ2Q96H96 371 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 SPACA5Q96QH8 159 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 PRR25Q96S07 402 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 P2RX4Q99571 388 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 PPIL3Q9H2H8 161 aaKnown RBP11.06□□□□□ -0.64
CCDC78-209ENST00000474647 PCDHB16Q9NRJ7 776 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 ZFP57Q9NU63 452 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 LRRC42Q9Y546 428 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
CCDC78-209ENST00000474647 A0A087X0M5 115 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 A0A1B0GX30 115 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 OR2T7P0C7T2 308 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 PRKACBP22694 351 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 SLC6A1P30531 599 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 GNG10P50151 68 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 MED21Q13503 144 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 LTC4SQ16873 150 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 SLC35E3Q7Z769 313 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 ZNF695Q8IW36 515 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 LEAP2Q969E1 77 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 FGGYQ96C11 551 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 KIRREL1Q96J84 757 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 PLCXD1Q9NUJ7 323 aa11.05□□□□□ -0.64
CCDC78-209ENST00000474647 RPL36Q9Y3U8 105 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms