RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ADARB1P78563 741 aaKnown RBP14.86□□□□□ -0.03
COL7A1-209ENST00000474432 HLA-DRB5Q30154 266 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 PIGYQ3MUY2 71 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OR13A1Q8NGR1 328 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OR13C5Q8NGS8 318 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 PLPPR1Q8TBJ4 325 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 GPR148Q8TDV2 347 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 TNFAIP8L1Q8WVP5 186 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 KIRREL1Q96J84 757 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 NR1H4Q96RI1 486 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-209ENST00000474432 NCOR1P1Q9H4R4 102 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 LINC00574Q9H8X3 128 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 KIF25Q9UIL4 384 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 DIMT1Q9UNQ2 313 aaKnown RBP14.86□□□□□ -0.03
COL7A1-209ENST00000474432 KBTBD11-OT1A0A1B0GTJ5 212 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 BUB1B-PAK6H3BSN5 160 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 HSPB6O14558 160 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 RPS11P62280 158 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL7A1-209ENST00000474432 PAX5Q02548 391 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 DOC2BQ14184 412 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 IL13RA2Q14627 380 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 LRRC36Q1X8D7 754 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 RSBN1Q5VWQ0 802 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-209ENST00000474432 LAIR2Q6ISS4 152 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 SATL1Q86VE3 508 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 ZNF596Q8TC21 504 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 TMEM106AQ96A25 262 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 OR5M11Q96RB7 305 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 BABAM2Q9NXR7 383 aa14.85□□□□□ -0.03
COL7A1-209ENST00000474432 TRBV5-5A0A0J9YX44 114 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 LEUTXA8MZ59 168 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 G3V4G9 280 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 FBXO24O75426 580 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 CDRT1O95170 752 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 AMY1AP04745 511 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 AMY2AP04746 511 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 IGFBP3P17936 291 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-209ENST00000474432 PAN3Q58A45 887 aaKnown RBP14.84□□□□□ -0.03
COL7A1-209ENST00000474432 TPTE2P1Q5T6R2 138 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-209ENST00000474432 SMIM19Q96E16 107 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 CITED2Q99967 270 aaPredicted RBP14.84□□□□□ -0.03
COL7A1-209ENST00000474432 OR6C3Q9NZP0 311 aa14.84□□□□□ -0.03
COL7A1-209ENST00000474432 NPIPB11E5RHQ5 1161 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 BEAN1Q3B7T3 259 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 SAMD5Q5TGI4 173 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 TMPRSS11AQ6ZMR5 421 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 OR4D6Q8NGJ1 314 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 GGHQ92820 318 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 GHSRQ92847 366 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 PGLYRP3Q96LB9 341 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 GPER1Q99527 375 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 LIN7BQ9HAP6 207 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 CALYQ9NYX4 217 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 IL36GQ9NZH8 169 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 ZNF281Q9Y2X9 895 aa14.83□□□□□ -0.04
COL7A1-209ENST00000474432 EXOSC1Q9Y3B2 195 aaKnown RBP14.83□□□□□ -0.04
COL7A1-209ENST00000474432 MEIKINA0A087WXM9 373 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 TRAV39A0A0B4J263 110 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 MAGEA13PA6NCF6 341 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 MAGEB3O15480 346 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 GPX5O75715 221 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 HTR3BO95264 441 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 CD2P06729 351 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 RSU1Q15404 277 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 NSUN5P1Q3KNT7 163 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 NHLRC3Q5JS37 347 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 KPRPQ5T749 579 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-209ENST00000474432 TTC23Q5W5X9 447 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 C16orf82Q7Z2V1 217 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 PACRGLQ8N7B6 248 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 OR52N1Q8NH53 320 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 CYGBQ8WWM9 190 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 LEAP2Q969E1 77 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 MMP28Q9H239 520 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 IFT22Q9H7X7 185 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 TMEM138Q9NPI0 162 aa14.82□□□□□ -0.04
COL7A1-209ENST00000474432 TRAV8-7A0A075B6U6 113 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 A0A1W2PP11 408 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 IRGMA1A4Y4 181 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A18PA6NE21 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A16PA6NEW6 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A20PA6NIJ5 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A9PA6NNJ1 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A12PA8MX19 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A5PA8MXJ8 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 IL1AP01583 271 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A15PP0C7V4 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A13PP0C7W8 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A14PP0C7W9 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 FAM90A24PP0C7X0 464 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 NFYBP25208 207 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 BRS3P32247 399 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 GLP1RP43220 463 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 VDAC2P45880 294 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-209ENST00000474432 PRRX1P54821 245 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 DIAPH2-AS1Q14236 149 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 TCTEX1D4Q5JR98 221 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 DDI2Q5TDH0 399 aa14.81□□□□□ -0.04
COL7A1-209ENST00000474432 NDUFA11Q86Y39 141 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms