RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 C17orf50Q8WW18 174 aa16.41■□□□□ 0.22
HLA-B-252ENST00000474381 NKX3-1Q99801 234 aaPredicted RBP16.41■□□□□ 0.22
HLA-B-252ENST00000474381 TMEM133Q9H2Q1 129 aa16.41■□□□□ 0.22
HLA-B-252ENST00000474381 ISYNA1Q9NPH2 558 aa16.41■□□□□ 0.22
HLA-B-252ENST00000474381 BLOC1S6Q9UL45 172 aa16.41■□□□□ 0.22
HLA-B-252ENST00000474381 MEGF11A6BM72 1044 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 ARG1P05089 322 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 GTF2F2P13984 249 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 ATXN7L3Q14CW9 347 aaPredicted RBP16.4■□□□□ 0.22
HLA-B-252ENST00000474381 MPV17LQ2QL34 196 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 LRRC75BQ2VPJ9 315 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 ACSM3Q53FZ2 586 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 LYPD6Q86Y78 171 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 MALSU1Q96EH3 234 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 MRPS24Q96EL2 167 aaKnown RBP16.4■□□□□ 0.22
HLA-B-252ENST00000474381 CNBD2Q96M20 576 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 SSX3Q99909 188 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 UQCC2Q9BRT2 126 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 BARHL1Q9BZE3 327 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 BEX1Q9HBH7 125 aa16.4■□□□□ 0.22
HLA-B-252ENST00000474381 MRPS28Q9Y2Q9 187 aaKnown RBP16.4■□□□□ 0.22
HLA-B-252ENST00000474381 TENM1Q9UKZ4 2725 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 IGHV2-26A0A0B4J1V2 119 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 SC5DO75845 299 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 OR7C1O76099 320 aaPredicted RBP16.39■□□□□ 0.21
HLA-B-252ENST00000474381 MAS1P04201 325 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 SERPINA2P20848 420 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 MDKP21741 143 aaPredicted RBP16.39■□□□□ 0.21
HLA-B-252ENST00000474381 RELBQ01201 579 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 TPBGQ13641 420 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 SLC22A6Q4U2R8 563 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 MINOS1Q5TGZ0 78 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 SHISA2Q6UWI4 295 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 PHYHIPQ92561 330 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 UFD1Q92890 307 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 CLEC7AQ9BXN2 247 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 MINOS1-NBL1R4GNA1 71 aa16.39■□□□□ 0.21
HLA-B-252ENST00000474381 ZNF729A6NN14 1252 aaPredicted RBP16.38■□□□□ 0.21
HLA-B-252ENST00000474381 H3BUX3 64 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 HSPB6O14558 160 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 OMGP23515 440 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 CDK2P24941 298 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 LHFPL4Q7Z7J7 247 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 RTN4RL2Q86UN3 420 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 ZNF565Q8N9K5 539 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 MUL1Q969V5 352 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 TMED9Q9BVK6 235 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 CCDC90BQ9GZT6 254 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 SLITRK2Q9H156 845 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 PPIL3Q9H2H8 161 aaKnown RBP16.38■□□□□ 0.21
HLA-B-252ENST00000474381 TCF7L1Q9HCS4 588 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 GHRLQ9UBU3 117 aa16.38■□□□□ 0.21
HLA-B-252ENST00000474381 GEMIN2O14893 280 aaKnown RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 MMP23AO75900 390 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 MLLT11Q13015 90 aaPredicted RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 DYNC1I2Q13409 638 aaKnown RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 TRAM1Q15629 374 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 RSBN1Q5VWQ0 802 aaPredicted RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 LIPKQ5VXJ0 399 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 AWAT2Q6E213 333 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 DHRS7BQ6IAN0 325 aaPredicted RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 GLIPR1L1Q6UWM5 242 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 OR4D6Q8NGJ1 314 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 TAF15Q92804 592 aaKnown RBP eCLIP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 DPCDQ9BVM2 203 aaPredicted RBP16.37■□□□□ 0.21
HLA-B-252ENST00000474381 SPACA1Q9HBV2 294 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 KIF25Q9UIL4 384 aa16.37■□□□□ 0.21
HLA-B-252ENST00000474381 MEIKINA0A087WXM9 373 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 UCHL1P09936 223 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 CGB3P0DN86 165 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 CGB7P0DN87 165 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 PSMA1P25786 263 aaKnown RBP16.36■□□□□ 0.21
HLA-B-252ENST00000474381 CD34P28906 385 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 GP2P55259 537 aaKnown RBP16.36■□□□□ 0.21
HLA-B-252ENST00000474381 INSL4Q14641 139 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 TBCEQ15813 527 aaPredicted RBP16.36■□□□□ 0.21
HLA-B-252ENST00000474381 PRAMEF5Q5TYX0 476 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 LIAT1Q6ZQX7 453 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 SUMF2Q8NBJ7 301 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 ZNF596Q8TC21 504 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 LINC00574Q9H8X3 128 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 RAB18Q9NP72 206 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 ING3Q9NXR8 418 aa16.36■□□□□ 0.21
HLA-B-252ENST00000474381 A0A087X0M5 115 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 KBTBD11-OT1A0A1B0GTJ5 212 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 A0A1B0GX30 115 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 A0A1W2PP11 408 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 CLPSL1A2RUU4 121 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A10PA6NDY2 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A18PA6NE21 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A16PA6NEW6 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A20PA6NIJ5 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A7PA6NKC0 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A22PA8MWA6 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A12PA8MX19 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A5PA8MXJ8 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A23PA8MXZ1 464 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 TSPAN9O75954 239 aa16.35■□□□□ 0.21
HLA-B-252ENST00000474381 FAM90A15PP0C7V4 464 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms