RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 HILPDAQ9Y5L2 63 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 PKD1L1Q8TDX9 2849 aa14.48□□□□□ -0.09
UPF3A-203ENST00000474056 TRAV8-7A0A075B6U6 113 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 FSTP19883 344 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 C17orf58Q2M2W7 97 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 MINOS1Q5TGZ0 78 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 CCBE1Q6UXH8 406 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-203ENST00000474056 TREML4Q6UXN2 200 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 NANOGP1Q8N7R0 232 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 NDNFQ8TB73 568 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 METTL9Q9H1A3 318 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 RAB18Q9NP72 206 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 ABCB10Q9NRK6 738 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 IL36GQ9NZH8 169 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 FBLN5Q9UBX5 448 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 TCF19Q9Y242 345 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 MINOS1-NBL1R4GNA1 71 aa14.47□□□□□ -0.09
UPF3A-203ENST00000474056 TRBV5-7A0A0A0MS05 114 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 A0A1W2PP11 408 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 A0A1W2PPK0 400 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 ZNF729A6NN14 1252 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-203ENST00000474056 GPX5O75715 221 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 CELP19835 753 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 SERPINA2P20848 420 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 GABRA5P31644 462 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 GLP1RP43220 463 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 OR52W1Q6IF63 320 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 LIAT1Q6ZQX7 453 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 TMEM219Q86XT9 240 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 ABHD12Q8N2K0 398 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 PLPPR1Q8TBJ4 325 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 ZNF286AQ9HBT8 521 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 KIF25Q9UIL4 384 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 ST3GAL6Q9Y274 331 aa14.46□□□□□ -0.09
UPF3A-203ENST00000474056 A6NDX4 124 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 CDK1P06493 297 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 KIR2DS4P43632 304 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 EFNB2P52799 333 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 RBM11P57052 281 aaKnown RBP14.45□□□□□ -0.1
UPF3A-203ENST00000474056 NHLRC3Q5JS37 347 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 UTF1Q5T230 341 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 RSBN1Q5VWQ0 802 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-203ENST00000474056 OSR2Q8N2R0 312 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 OR4D6Q8NGJ1 314 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 OR4C13Q8NGP0 309 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 OR13A1Q8NGR1 328 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 DERL3Q96Q80 235 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 S100A13Q99584 98 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 RANBP3Q9H6Z4 567 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-203ENST00000474056 TCF7L1Q9HCS4 588 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 OR6C3Q9NZP0 311 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 CKLFQ9UBR5 152 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 ERGIC3Q9Y282 383 aa14.45□□□□□ -0.1
UPF3A-203ENST00000474056 MEIKINA0A087WXM9 373 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 TIMM23O14925 209 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 PIN1P1O15428 100 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 IGLV1-47P01700 117 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 CSTBP04080 98 aaKnown RBP14.44□□□□□ -0.1
UPF3A-203ENST00000474056 MAS1P04201 325 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 CD1AP06126 327 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 CGB3P0DN86 165 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 CGB7P0DN87 165 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 HTR1DP28221 377 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 CD34P28906 385 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 DYNLT3P51808 116 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 C6orf141Q5SZD1 244 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 RTN4RL2Q86UN3 420 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 SUMF2Q8NBJ7 301 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 SGCDQ92629 289 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 NPFFR1Q9GZQ6 430 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 FOXJ3Q9UPW0 622 aa14.44□□□□□ -0.1
UPF3A-203ENST00000474056 KBTBD11-OT1A0A1B0GTJ5 212 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 F2RL2O00254 374 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 GEMIN2O14893 280 aaKnown RBP14.43□□□□□ -0.1
UPF3A-203ENST00000474056 OR7C1O76099 320 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-203ENST00000474056 KCNJ3P48549 501 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 BDH1Q02338 343 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 PAX5Q02548 391 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 GABPB1Q06547 395 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-203ENST00000474056 HLA-DRB5Q30154 266 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 SLC22A6Q4U2R8 563 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 JAGN1Q8N5M9 183 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 OR2T6Q8NHC8 308 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 ZNF596Q8TC21 504 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 MUL1Q969V5 352 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 KIRREL1Q96J84 757 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 DPCDQ9BVM2 203 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-203ENST00000474056 MND1Q9BWT6 205 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 CDCA4Q9BXL8 241 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 BARHL1Q9BZE3 327 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 NCOR1P1Q9H4R4 102 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 ZNF702PQ9H963 129 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 PAK1IP1Q9NWT1 392 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-203ENST00000474056 CALYQ9NYX4 217 aa14.43□□□□□ -0.1
UPF3A-203ENST00000474056 A0A087X0M5 115 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 TRAV39A0A0B4J263 110 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 A0A1B0GX30 115 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 ERICH4A6NGS2 130 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 PTGES3LE9PB15 166 aa14.42□□□□□ -0.1
UPF3A-203ENST00000474056 ZNF780AO75290 641 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms