RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SRRQ9GZT4 340 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 AGPAT3Q9NRZ7 376 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 IMP3Q9NV31 184 aaKnown RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 COQ4Q9Y3A0 265 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ALG5Q9Y673 324 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RBBP6Q7Z6E9 1792 aaKnown RBP2.9□□□□□ -1.94
BRCA1-212ENST00000473961 BAZ2AQ9UIF9 1905 aaKnown RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TRBV6-6A0A0A6YYG2 114 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 IGHV3-66A0A0C4DH42 116 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 IGHV3-64DA0A0J9YX35 117 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 PLAC8L1A1L4L8 177 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF879B4DU55 563 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 H3BN98 237 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 AIPO00170 330 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 UPK1AO00322 258 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 NME4O00746 187 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 PHYHO14832 338 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 FABP7O15540 132 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TPST1O60507 370 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 SLC19A2O60779 497 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 SS18L1O75177 396 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RBBP9O75884 186 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 IFNGP01579 166 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 HLA-DQB1P01920 261 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RLN2P04090 185 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 OR8U9P0C7N5 309 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF19P17023 458 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 KDELR1P24390 212 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 GADD45AP24522 165 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 PFN2P35080 140 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 CD79BP40259 229 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 NBL1P41271 181 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MAGEA3P43357 314 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MAP2K4P45985 399 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 GCLMP48507 274 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TGM4P49221 684 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RND2P52198 227 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TAS2R60P59551 318 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 DNAJB13P59910 316 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 NDPQ00604 133 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 IL5RAQ01344 420 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 DEFA6Q01524 100 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 COTL1Q14019 142 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 DGCR6Q14129 220 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 IRF4Q15306 451 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 VAMP3Q15836 100 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 GABRA6Q16445 453 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 C5orf64Q2M2E5 130 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 CYB5R2Q6BCY4 276 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ARL9Q6T311 187 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 FAM92BQ6ZTR7 304 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 OR2W3Q7Z3T1 314 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 CBLN2Q8IUK8 224 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 UBAC2Q8NBM4 344 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MDS2Q8NDY4 140 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 C19orf18Q8NEA5 215 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 OR8U1Q8NH10 309 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 OR5K1Q8NHB7 308 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 SPPL2BQ8TCT7 592 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ABHD3Q8WU67 409 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 HGDQ93099 445 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF707Q96C28 371 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TM4SF18Q96CE8 201 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 BMFQ96LC9 184 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 Q96MT0 163 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ERMAPQ96PL5 475 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RBP7Q96R05 134 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 COPS4Q9BT78 406 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MED28Q9H204 178 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MIXL1Q9H2W2 232 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 NIT2Q9NQR4 276 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RBFOX1Q9NWB1 397 aaKnown RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 RBAKQ9NYW8 714 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 MED11Q9P086 117 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 CCDC167Q9P0B6 97 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 TP53TG5Q9Y2B4 290 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 SAMHD1Q9Y3Z3 626 aaKnown RBP2.9□□□□□ -1.95
BRCA1-212ENST00000473961 ARAP2Q8WZ64 1704 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 PTPRJQ12913 1337 aa2.9□□□□□ -1.95
BRCA1-212ENST00000473961 SCN7AQ01118 1682 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 FABP12A6NFH5 140 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 NCBP2LA6PVI3 153 aaKnown RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 D6RAR5 112 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 INMT-MINDY4F8WBC2 141 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 M0R233 179 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 DFFAO00273 331 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 GNGT2O14610 69 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PDCD5O14737 125 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PLA2G10O15496 165 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 KDELR3O43731 214 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 FADS2O95864 444 aaKnown RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 IFNA10P01566 189 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 EIF4EP06730 217 aaKnown RBP2.89□□□□□ -1.95
BRCA1-212ENST00000473961 KLK1P06870 262 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 CD3GP09693 182 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 IL1RNP18510 177 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 PGAM1P18669 254 aa2.89□□□□□ -1.95
BRCA1-212ENST00000473961 OGNP20774 298 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms