RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 GZMHP20718 246 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 BGNP21810 368 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 RAB38P57729 211 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 RAB25P57735 213 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 C2orf80Q0P641 193 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 TNXAQ16473 311 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 SCXQ7RTU7 201 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 NELFBQ8WX92 580 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 CPB2Q96IY4 423 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 RMND1Q9NWS8 449 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 BZW2Q9Y6E2 419 aaKnown RBP2.05□□□□□ -2.08
CLK1-209ENST00000472679 ICE1Q9Y2F5 2266 aa2.05□□□□□ -2.08
CLK1-209ENST00000472679 LECT2O14960 151 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 SPOPO43791 374 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 SH2D1AO60880 128 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 POP7O75817 140 aaKnown RBP2.04□□□□□ -2.08
CLK1-209ENST00000472679 CSTAP01040 98 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 EVI2BP34910 448 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 GOLGA7BQ2TAP0 167 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 PYCR3Q53H96 274 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 ZNF322Q6U7Q0 402 aaPredicted RBP2.04□□□□□ -2.08
CLK1-209ENST00000472679 ZIC4Q8N9L1 334 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 OR4A5Q8NH83 315 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 REEP6Q96HR9 211 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 CIB1Q99828 191 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 SLC23A2Q9UGH3 650 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 BTRCQ9Y297 605 aa2.04□□□□□ -2.08
CLK1-209ENST00000472679 CHTOPQ9Y3Y2 248 aaKnown RBP2.04□□□□□ -2.08
CLK1-209ENST00000472679 IGHV2-26A0A0B4J1V2 119 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 TCF21O43680 179 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 CA2P00918 260 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 TTPAP49638 278 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 DSTNP60981 165 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 DEFB103AP81534 67 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 PSG4Q00888 419 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 ZCWPW2Q504Y3 356 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 C10orf91Q5T1B1 145 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 TCF23Q7RTU1 214 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 SPICQ8N5J4 248 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 GATD1Q8NB37 220 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 OR8G5Q8NG78 346 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 OR11G2Q8NGC1 345 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 OR8K1Q8NGG5 319 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 OR2AE1Q8NHA4 323 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 OR2V1Q8NHB1 315 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 LGALS14Q8TCE9 139 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 CMBLQ96DG6 245 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 LINC00588Q9Y4M8 146 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 URGCP-MRPS24S4R325 110 aa2.03□□□□□ -2.08
CLK1-209ENST00000472679 TNIKQ9UKE5 1360 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 PDCD6O75340 191 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 RANBP1P43487 201 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 XIAPP98170 497 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 PCOTHQ58A44 107 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 NIPAL1Q6NVV3 410 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 C10orf107Q8IVU9 208 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 FER1L6-AS1Q8NA97 138 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 SUCNR1Q9BXA5 334 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 ARL6Q9H0F7 186 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 TUBA4BQ9H853 241 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 PHLDA3Q9Y5J5 127 aa2.02□□□□□ -2.09
CLK1-209ENST00000472679 LCTP09848 1927 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 E7EWF7 191 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 H0YC42 278 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 GIMD1P0DJR0 217 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 OR12D1P0DN82 309 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 SLC2A1P11166 492 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 IFI30P13284 250 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 CD99P14209 185 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 CEACAM21Q3KPI0 293 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 Q6ZRU5 148 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 CLEC20AQ6ZU45 233 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 KRTCAP2Q8N6L1 136 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 OR5C1Q8NGR4 320 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 MFSD8Q8NHS3 518 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 ZMYND19Q96E35 227 aaPredicted RBP2.01□□□□□ -2.09
CLK1-209ENST00000472679 APOL4Q9BPW4 351 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 HINT2Q9BX68 163 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 MFSD1Q9H3U5 465 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 RPUSD1Q9UJJ7 312 aaKnown RBP2.01□□□□□ -2.09
CLK1-209ENST00000472679 POMPQ9Y244 141 aa2.01□□□□□ -2.09
CLK1-209ENST00000472679 YLPM1P49750 1951 aaKnown RBP2.01□□□□□ -2.09
CLK1-209ENST00000472679 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
CLK1-209ENST00000472679 hCG_2039718K7EN88 272 aa2□□□□□ -2.09
CLK1-209ENST00000472679 ZMPSTE24O75844 475 aa2□□□□□ -2.09
CLK1-209ENST00000472679 IGKV1-16P04430 117 aa2□□□□□ -2.09
CLK1-209ENST00000472679 GYPCP04921 128 aa2□□□□□ -2.09
CLK1-209ENST00000472679 GUSBP08236 651 aa2□□□□□ -2.09
CLK1-209ENST00000472679 P0DMU3 169 aa2□□□□□ -2.09
CLK1-209ENST00000472679 FAM231AP0DMU4 169 aa2□□□□□ -2.09
CLK1-209ENST00000472679 FAM231CP0DMU5 169 aa2□□□□□ -2.09
CLK1-209ENST00000472679 PSKH1P11801 424 aa2□□□□□ -2.09
CLK1-209ENST00000472679 ZNF3P17036 446 aa2□□□□□ -2.09
CLK1-209ENST00000472679 PSMB9P28065 219 aa2□□□□□ -2.09
CLK1-209ENST00000472679 HBG1P69891 147 aa2□□□□□ -2.09
CLK1-209ENST00000472679 HBG2P69892 147 aa2□□□□□ -2.09
CLK1-209ENST00000472679 BAXQ07812 192 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms