RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 ZNF738Q8NE65 137 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 CASTOR1Q8WTX7 329 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 TWIST2Q8WVJ9 160 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 SLC25A31Q9H0C2 315 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 GABARAPL1Q9H0R8 117 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 MFSD1Q9H3U5 465 aa1.72□□□□□ -2.13
PTCD3-209ENST00000472044 MYO15BQ96JP2 1530 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 IGLV10-54A0A075B6I4 117 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 IGHV1-45A0A0A0MS14 117 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 A0A0B4J2C4 111 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 A0A1B0GU33 70 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 ZNF879B4DU55 563 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 TMEM250H0YL14 139 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 H3BMM0 161 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 I3L4J1 428 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 PSCAO43653 123 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 ZNF708P17019 499 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 LCN1P31025 176 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 C1QTNF8P60827 252 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 HBG1P69891 147 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 HBG2P69892 147 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 MMDQ15546 238 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 TRAM1Q15629 374 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 TRIP13Q15645 432 aaPredicted RBP1.71□□□□□ -2.14
PTCD3-209ENST00000472044 LGALSLQ3ZCW2 172 aaPredicted RBP1.71□□□□□ -2.14
PTCD3-209ENST00000472044 FBXO48Q5FWF7 155 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 LYZL2Q7Z4W2 148 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 MARCH3Q86UD3 253 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 Q8NAQ8 132 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 MUC7Q8TAX7 377 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 MAL2Q969L2 176 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 UBE2WQ96B02 151 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 TRIB3Q96RU7 358 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 LINC01587Q99440 93 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 OR2D2Q9H210 308 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 AGPAT3Q9NRZ7 376 aa1.71□□□□□ -2.14
PTCD3-209ENST00000472044 FAM183AA6NL82 134 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 H3BP45 60 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 CRXO43186 299 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 PSIP1O75475 530 aaKnown RBP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 SOX14O95416 240 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 PSMB9P28065 219 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 FUSP35637 526 aaKnown RBP eCLIP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 MAGEA3P43357 314 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 BSXQ3C1V8 233 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 ZCWPW2Q504Y3 356 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 FAM162BQ5T6X4 162 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 NXNL2Q5VZ03 156 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 CYHR1Q6ZMK1 362 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 FAM183BPQ6ZVS7 135 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 MRPL52Q86TS9 123 aaKnown RBP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 TMEM25Q86YD3 366 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 OR5P2Q8WZ92 322 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 SLC25A44Q96H78 314 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 B9D2Q9BPU9 175 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 APOL4Q9BPW4 351 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 ULBP1Q9BZM6 244 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 MRM2Q9UI43 246 aaKnown RBP1.7□□□□□ -2.14
PTCD3-209ENST00000472044 MYO5BQ9ULV0 1848 aa1.7□□□□□ -2.14
PTCD3-209ENST00000472044 USP42Q9H9J4 1324 aaKnown RBP1.69□□□□□ -2.14
PTCD3-209ENST00000472044 CEP170Q5SW79 1584 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 IGKV1D-37A0A075B6S9 117 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 E7EQL1 145 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 RNASEK-C17orf49H0YIS7 233 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 FADS2O95864 444 aaKnown RBP1.69□□□□□ -2.14
PTCD3-209ENST00000472044 OPN1SWP03999 348 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 GABRA1P14867 456 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 CTLA4P16410 223 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 GZMMP51124 257 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 PRDX1Q06830 199 aaKnown RBP1.69□□□□□ -2.14
PTCD3-209ENST00000472044 BCL2A1Q16548 175 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 TMPPEQ6ZT21 453 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 CLEC20AQ6ZU45 233 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 FAM45AQ8TCE6 357 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 OR5P3Q8WZ94 311 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 CCDC124Q96CT7 223 aaKnown RBP1.69□□□□□ -2.14
PTCD3-209ENST00000472044 CMBLQ96DG6 245 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 NAGKQ9UJ70 344 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 BRD4O60885 1362 aaPredicted RBP1.69□□□□□ -2.14
PTCD3-209ENST00000472044 DOCK6Q96HP0 2047 aa1.69□□□□□ -2.14
PTCD3-209ENST00000472044 TRBV24-1A0A075B6N3 115 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 A0A1W2PNM2 257 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 A0A1W2PRG6 482 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 GOLGA8IPA6NC78 632 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 OR5H14A6NHG9 310 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 FABP7O15540 132 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 CDS2O95674 445 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 LDOC1O95751 146 aaPredicted RBP1.68□□□□□ -2.14
PTCD3-209ENST00000472044 GPR75O95800 540 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 UGT2B10P36537 528 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 CBX5P45973 191 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 HADHBP55084 474 aaKnown RBP1.68□□□□□ -2.14
PTCD3-209ENST00000472044 RHOAP61586 193 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 STX3Q13277 289 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 PYCR3Q53H96 274 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 AHSA2Q719I0 299 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 COPS6Q7L5N1 327 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 LYPD6Q86Y78 171 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 C10orf107Q8IVU9 208 aa1.68□□□□□ -2.14
PTCD3-209ENST00000472044 SPERTQ8NA61 448 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms