RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 UBE2J1Q9Y385 318 aaPredicted RBP6.42□□□□□ -1.38
USP48-207ENST00000471752 GMPPBQ9Y5P6 360 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 LOC100130705A0A1B0GUX0 176 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 WI2-2373I1.2A0A1W2PRP0 233 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 ZNF736B4DX44 427 aaPredicted RBP6.41□□□□□ -1.38
USP48-207ENST00000471752 H0YJX3 145 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 K7EIL1 84 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 GABRPO00591 440 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 ATP5HO75947 161 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 SNRNP70P08621 437 aaKnown RBP6.41□□□□□ -1.38
USP48-207ENST00000471752 SSTR5P35346 364 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 VHLP40337 213 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 HLA-DRB5Q30154 266 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 C9orf152Q5JTZ5 239 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 SPIN3Q5JUX0 258 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 TPTE2P1Q5T6R2 138 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 ZNF691Q5VV52 312 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 LAIR2Q6ISS4 152 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 KCTD20Q7Z5Y7 419 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 NDUFA11Q86Y39 141 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 PARP16Q8N5Y8 322 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 DRAM1Q8N682 238 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 ZFP41Q8N8Y5 198 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 CNIH3Q8TBE1 160 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 MRGPRDQ8TDS7 321 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 STMN2Q93045 179 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 C10orf35Q96D05 121 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 SLC25A33Q9BSK2 321 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 S100A14Q9HCY8 104 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 PSG11Q9UQ72 335 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
USP48-207ENST00000471752 MEIKINA0A087WXM9 373 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 TRGV10A0A0A0MS01 117 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 IGHV3-43A0A0B4J1X8 118 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 IGHV3-72A0A0B4J1Y9 119 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 KBTBD11-OT1A0A1B0GTJ5 212 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PPK0 400 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A18PA6NE21 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A16PA6NEW6 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A20PA6NIJ5 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A9PA6NNJ1 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A12PA8MX19 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A5PA8MXJ8 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 SLC31A2O15432 143 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 SULT1B1O43704 296 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 MPIG6BO95866 241 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 HCKP08631 526 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A15PP0C7V4 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A13PP0C7W8 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A14PP0C7W9 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 FAM90A24PP0C7X0 464 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 IGHV3-43DP0DP04 118 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CD34P28906 385 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 HOXD3P31249 432 aaPredicted RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 REG1BP48304 166 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 GNG10P50151 68 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 RASSF2P50749 326 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 EMX1Q04741 257 aaPredicted RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 RSBN1Q5VWQ0 802 aaPredicted RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 MEDAGQ5VYS4 303 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 ASCL4Q6XD76 172 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 ETV3LQ6ZN32 361 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 Q8IYB0 196 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 SUMF2Q8NBJ7 301 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CCDC54Q8NEL0 328 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 OR51T1Q8NGJ9 327 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 OR56B4Q8NH76 319 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 OR5AK2Q8NH90 309 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 MRAPQ8TCY5 172 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CCDC107Q8WV48 283 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 TNFAIP8L1Q8WVP5 186 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CAPSLQ8WWF8 208 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 SGCDQ92629 289 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 SPSB1Q96BD6 273 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 DUX3Q96PT4 197 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 JAM3Q9BX67 310 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 MRPS18AQ9NVS2 196 aaKnown RBP6.4□□□□□ -1.38
USP48-207ENST00000471752 TAS2R3Q9NYW6 316 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 CALYQ9NYX4 217 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 ENOPH1Q9UHY7 261 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 ING4Q9UNL4 249 aa6.4□□□□□ -1.38
USP48-207ENST00000471752 TRAV8-7A0A075B6U6 113 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 A0A087X0M5 115 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 A0A1B0GX30 115 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 A0A1W2PPI3 338 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 LEUTXA8MZ59 168 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 J3QR06 171 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 TOR1AO14656 332 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 GEMIN2O14893 280 aaKnown RBP6.39□□□□□ -1.39
USP48-207ENST00000471752 OR2F2O95006 317 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 HTR3BO95264 441 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 CYB5AP00167 134 aa6.39□□□□□ -1.39
USP48-207ENST00000471752 CCDC159P0C7I6 412 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms