RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DNAJB9Q9UBS3 223 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 NUFIP1Q9UHK0 495 aaKnown RBP5.32□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF107Q9UII5 783 aaPredicted RBP5.32□□□□□ -1.56
HDAC1-204ENST00000471488 OR52A1Q9UKL2 312 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 PSG11Q9UQ72 335 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 V9GYS6 101 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 HERC2O95714 4834 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 KIAA2026Q5HYC2 2103 aa5.32□□□□□ -1.56
HDAC1-204ENST00000471488 FRAS1Q86XX4 4008 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 IGHV1-3A0A0C4DH29 117 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 MAGEA13PA6NCF6 341 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 ACOD1A6NK06 481 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 I3L521 148 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 DEGS1O15121 323 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 SYT7O43581 403 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 DEDDO75618 318 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 BRI3O95415 125 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 MOSP00540 346 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 CNTFRP26992 372 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 PSMB8P28062 276 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 CD34P28906 385 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 C21orf33P30042 268 aaPredicted RBP5.31□□□□□ -1.56
HDAC1-204ENST00000471488 CDC42P60953 191 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 CXCR4P61073 352 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 GINS1Q14691 196 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 SPIN3Q5JUX0 258 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 TMEM42Q69YG0 159 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 ACSM6Q6P461 480 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 CYP2R1Q6VVX0 501 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 LYPD6Q86Y78 171 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF679Q8IYX0 411 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 TCEANCQ8N8B7 351 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF565Q8N9K5 539 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 UBALD1Q8TB05 177 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 MRGPRDQ8TDS7 321 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 SPACA5Q96QH8 159 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 S1PR3Q99500 378 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 TBX5Q99593 518 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 NIPSNAP1Q9BPW8 284 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 OR51J1Q9H342 316 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 REEP1Q9H902 201 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 PLEKHA3Q9HB20 300 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 KIF25Q9UIL4 384 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 MAGEL2Q9UJ55 1249 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 STUB1Q9UNE7 303 aa5.31□□□□□ -1.56
HDAC1-204ENST00000471488 SAMHD1Q9Y3Z3 626 aaKnown RBP5.31□□□□□ -1.56
HDAC1-204ENST00000471488 IGHV3-43A0A0B4J1X8 118 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 TRBV2A0A0J9YWF9 115 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 A0A1B0GTI1 187 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 KBTBD11-OT1A0A1B0GTJ5 212 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 A0A1W2PN81 502 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 PRR32B1ATL7 298 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF736B4DX44 427 aaPredicted RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ARPC2O15144 300 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 PRODHO43272 600 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 HSPA12AO43301 675 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF254O75437 659 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 E2F6O75461 281 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 SEMG1P04279 462 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 IGHV3-43DP0DP04 118 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 SNRPBP14678 240 aaKnown RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF20P17024 532 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 SSTR5P35346 364 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 CHRNA7P36544 502 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 RBP2P50120 134 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 RAB9AP51151 201 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 F2RL1P55085 397 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ACTR3P61158 418 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 MMDQ15546 238 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 MICAQ29983 383 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 PAN3Q58A45 887 aaKnown RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 RNLSQ5VYX0 342 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF322Q6U7Q0 402 aaPredicted RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ELMOD2Q8IZ81 293 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 Q8N1Y9 231 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 YIPF7Q8N8F6 280 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 OR10G2Q8NGC3 310 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 OR13A1Q8NGR1 328 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 GATAD1Q8WUU5 269 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 ASB17Q8WXJ9 295 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 CORO2AQ92828 525 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 RNF166Q96A37 237 aaPredicted RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 COQ2Q96H96 371 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 MS4A10Q96PG2 267 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 TEX12Q9BXU0 123 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 YIPF3Q9GZM5 350 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 MOB1AQ9H8S9 216 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 HMG20AQ9NP66 347 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 C19orf73Q9NVV2 129 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 FAM118AQ9NWS6 357 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 CHCHD3Q9NX63 227 aaKnown RBP5.3□□□□□ -1.56
HDAC1-204ENST00000471488 SNX5Q9Y5X3 404 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 CEPT1Q9Y6K0 416 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 R4GMQ9 66 aa5.3□□□□□ -1.56
HDAC1-204ENST00000471488 TRAV41A0A0B4J266 112 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ZNF670-ZNF695F2Z2N8 137 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 H0YJX3 145 aa5.29□□□□□ -1.56
HDAC1-204ENST00000471488 ATP6V0E1O15342 81 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms