RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 SLC35G3Q8N808 338 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 OR2M3Q8NG83 312 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 CASTOR1Q8WTX7 329 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 DOK1Q99704 481 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 THTPAQ9BU02 230 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 METTL9Q9H1A3 318 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 KLK12Q9UKR0 248 aa4.08□□□□□ -1.76
SMC5-202ENST00000471372 C14orf166Q9Y224 244 aaKnown RBP4.08□□□□□ -1.76
SMC5-202ENST00000471372 METTL15A6NJ78 407 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 TCF21O43680 179 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 SOX14O95416 240 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 SLC6A1P30531 599 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 SMAGPQ0VAQ4 97 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 MLLT11Q13015 90 aaPredicted RBP4.07□□□□□ -1.76
SMC5-202ENST00000471372 BTN1A1Q13410 526 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 LRRC26Q2I0M4 334 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 ELP2Q6IA86 826 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 SMIM12Q96EX1 92 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 PPP1R36Q96LQ0 422 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 ZNF285Q96NJ3 590 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 LINC00574Q9H8X3 128 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 UCK1Q9HA47 277 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 RAB26Q9ULW5 256 aa4.07□□□□□ -1.76
SMC5-202ENST00000471372 POLR3HQ9Y535 204 aaPredicted RBP4.07□□□□□ -1.76
SMC5-202ENST00000471372 NOS1P29475 1434 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 MIA3Q5JRA6 1907 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 H0Y980 276 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 ZW10O43264 779 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 OR7C2O60412 319 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 MUC1P15941 1255 aaPredicted RBP4.06□□□□□ -1.76
SMC5-202ENST00000471372 ELK4P28324 431 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 ZNF816Q0VGE8 651 aaPredicted RBP4.06□□□□□ -1.76
SMC5-202ENST00000471372 FAM53BQ14153 422 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 GOLGA7BQ2TAP0 167 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 PDZD11Q5EBL8 140 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 DCXRQ7Z4W1 244 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 OR52E4Q8NGH9 312 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 OR11L1Q8NGX0 322 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 ITFG2Q969R8 447 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 PPCDCQ96CD2 204 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 KCTD7Q96MP8 289 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 TMEM208Q9BTX3 173 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 CHST5Q9GZS9 411 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 ARL6Q9H0F7 186 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 FAM206AQ9NX38 181 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 OPN4Q9UHM6 478 aa4.06□□□□□ -1.76
SMC5-202ENST00000471372 ZNF850A8MQ14 1090 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 K7EPK0 472 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 M0QZ92 97 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 AZIN1O14977 448 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 RGS5O15539 181 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 MPIP34949 423 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 IFNGR2P38484 337 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 MGAT3Q09327 533 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 COX19Q49B96 90 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 ABCA11PQ4W5N1 156 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 TTMPQ5BVD1 217 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 FAM71E1Q6IPT2 247 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 PRSS54Q6PEW0 395 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 MIR7-3HGQ8N6C7 128 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 TMEM105Q8N8V8 129 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 ITLN2Q8WWU7 325 aaPredicted RBP4.05□□□□□ -1.76
SMC5-202ENST00000471372 MS4A6AQ9H2W1 248 aa4.05□□□□□ -1.76
SMC5-202ENST00000471372 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
SMC5-202ENST00000471372 PTPRKQ15262 1439 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 ISLRO14498 428 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 SLC16A4O15374 487 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 OR5AC1P0C628 307 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 CELP19835 753 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 MP68P56378 58 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 RAB2AP61019 212 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 CLEC12BQ2HXU8 276 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 FAM19A5Q7Z5A7 132 aaPredicted RBP4.04□□□□□ -1.76
SMC5-202ENST00000471372 MTERF4Q7Z6M4 381 aaKnown RBP4.04□□□□□ -1.76
SMC5-202ENST00000471372 CPNE9Q8IYJ1 553 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 RNF133Q8WVZ7 376 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 CDCA4Q9BXL8 241 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 SLC22A4Q9H015 551 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 CABIN1Q9Y6J0 2220 aa4.04□□□□□ -1.76
SMC5-202ENST00000471372 DOCK9Q9BZ29 2069 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 NOTCH3Q9UM47 2321 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 WISP3O95389 354 aaPredicted RBP4.03□□□□□ -1.76
SMC5-202ENST00000471372 LHBP01229 141 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 TYMSP04818 313 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 GTF2F2P13984 249 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 GTF2BQ00403 316 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 ZNF616Q08AN1 781 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 SKP2Q13309 424 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 TMEM215Q68D42 235 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 UNQ9165/PRO28630Q6UXU0 137 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 DPPA2Q7Z7J5 298 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 C2orf15Q8WU43 125 aaKnown RBP4.03□□□□□ -1.76
SMC5-202ENST00000471372 CLDN23Q96B33 292 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 IP6K3Q96PC2 410 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 FGFR1OP2Q9NVK5 253 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 HMGXB4Q9UGU5 601 aa4.03□□□□□ -1.76
SMC5-202ENST00000471372 RIMS2Q9UQ26 1411 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms