RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 A0A0A6YYD5 115 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 A0A1W2PPI3 338 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KANTRA0A1W2PQU2 76 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 J3KTA2 159 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ETV2O00321 342 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 CLDN5O00501 218 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PTGESO14684 152 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TRAF3IP2O43734 574 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TRGC2P03986 189 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 HLA-DOAP06340 250 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 MMP7P09237 267 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF728P0DKX0 622 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 IGLC2P0DOY2 106 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 FGF3P11487 239 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 SLC25A4P12235 298 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ORM2P19652 201 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 IGFBP6P24592 240 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 HRH1P35367 487 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 NBL1P41271 181 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TNFRSF4P43489 277 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PTH2RP49190 550 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 THBS3P49746 956 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KLK7P49862 253 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 RND2P52198 227 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ATP1B3P54709 279 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 GALCP54803 685 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 XGP55808 180 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF121P58317 390 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 YPEL3P61236 119 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 GRB2P62993 217 aaKnown RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 RAE1P78406 368 aaKnown RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TIAL1Q01085 375 aaKnown RBP eCLIP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OC90Q02509 493 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 FOXL1Q12952 345 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TIGITQ495A1 244 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ADAMTSL5Q6ZMM2 481 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM91Q6ZNR0 172 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZSR9 355 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZT83 130 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PIP4P1Q86T03 277 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF429Q86V71 674 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 MARCH9Q86YJ5 346 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KRTAP1-3Q8IUG1 177 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OR2L13Q8N349 312 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KLHDC1Q8N7A1 406 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OR52E2Q8NGJ4 325 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OR51T1Q8NGJ9 327 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 OR10Q1Q8NGQ4 319 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 NDRG1Q92597 394 aaKnown RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 SLAMF6Q96DU3 332 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PCED1BQ96HM7 432 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 C20orf173Q96LM9 149 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 IP6K3Q96PC2 410 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 RASL10BQ96S79 203 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 WDR61Q9GZS3 305 aaKnown RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 GABARAPL1Q9H0R8 117 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 FAM234AQ9H0X4 552 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 SMDT1Q9H4I9 107 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 IDI2-AS1Q9NZ38 188 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PLEKHB1Q9UF11 243 aaPredicted RBP4.4□□□□□ -1.71
COL3A1-205ENST00000470167 CES1P1Q9UKY3 287 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 LOXL2Q9Y4K0 774 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 HS3ST3B1Q9Y662 390 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 PLXND1Q9Y4D7 1925 aa4.4□□□□□ -1.71
COL3A1-205ENST00000470167 FOCADQ5VW36 1801 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TRBV9A0A0B4J1U6 114 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 A0A0G2JLL6 359 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 A0A1B0GW64 132 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 OR4C46A6NHA9 309 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 BBIP1A8MTZ0 92 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM233B4DJY2 109 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 MS4A18H0YCH9 400 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 J3KR12 359 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 IFNL4K9M1U5 179 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 M0R2Z0 102 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 NME4O00746 187 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 GAPDHSO14556 408 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 CDC42EP2O14613 210 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 AGPAT2O15120 278 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 XRCC3O43542 346 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 CD5LO43866 347 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 PRKNO60260 465 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 B4GALT3O60512 393 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 VIPP01282 170 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 APOA2P02652 100 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 HLA-DQB2P05538 268 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 NHLRC4P0CG21 123 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 LIMS3P0CW19 117 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 LIMS4P0CW20 117 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 AKAIN1P0CW23 69 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms