RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 COQ3Q9NZJ6 369 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 COMMD9Q9P000 198 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 IL36RNQ9UBH0 155 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 OPN4Q9UHM6 478 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 DUSP13Q9UII6 198 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 ITGB1BP2Q9UKP3 347 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 FZR1Q9UM11 496 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 ATP23Q9Y6H3 246 aa7.92□□□□□ -1.14
SMC1A-205ENST00000469129 RAI1Q7Z5J4 1906 aaPredicted RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ATRXP46100 2492 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 TRAV24A0A0B4J272 114 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 TRDCB7Z8K6 153 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 SMLR1H3BR10 107 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 IFNL4K9M1U5 179 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 SIRPB1O00241 398 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 SLC33A1O00400 549 aaPredicted RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 OR2H2O95918 312 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 IFNA2P01563 188 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 CHRNB4P30926 498 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 RBMXP38159 391 aaKnown RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 SRSF4Q08170 494 aaKnown RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 PDCD1Q15116 288 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 FBXL19-AS1Q494R0 122 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 PRAMEF6Q5VXH4 476 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ZNF660Q6AZW8 331 aaPredicted RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ZNF880Q6PDB4 577 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 WDR82Q6UXN9 313 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ACP7Q6ZNF0 438 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ADAD2Q8NCV1 583 aaKnown RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 OR2Z1Q8NG97 314 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 OR5T2Q8NGG2 359 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 MRPL30Q8TCC3 161 aaKnown RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 TMEM171Q8WVE6 324 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 RDH5Q92781 318 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 MRPL24Q96A35 216 aaKnown RBP7.91□□□□□ -1.14
SMC1A-205ENST00000469129 TMEM230Q96A57 120 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 SYT3Q9BQG1 590 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 CABLES2Q9BTV7 478 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 WDR13Q9H1Z4 485 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 MSL2Q9HCI7 577 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 C1orf123Q9NWV4 160 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 ZDHHC8Q9ULC8 765 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 HSPB11Q9Y547 144 aa7.91□□□□□ -1.14
SMC1A-205ENST00000469129 PIGBOS1A0A0B4J2F0 54 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TMEM30CPA0ZSE6 113 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CRYM-AS1A6NIL9 109 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 DBX1A6NMT0 343 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 HMSDA8MTL9 139 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 SRRM5B3KS81 715 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 NPIPB11E5RHQ5 1161 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 HSPB6O14558 160 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 ABCD4O14678 606 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 HS3ST1O14792 307 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 C1QL1O75973 258 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 PPYP01298 95 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CD8AP01732 235 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 DUSP1P28562 367 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 S100GP29377 79 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 FCGR2CP31995 323 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CFHR2P36980 270 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 GATA4P43694 442 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 H2BFSP57053 126 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 SRPXP78539 464 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CYCSP99999 105 aaKnown RBP7.9□□□□□ -1.14
SMC1A-205ENST00000469129 BAMBIQ13145 260 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TRAT1Q6PIZ9 186 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 VHLLQ6RSH7 139 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CLEC18BQ6UXF7 455 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 GSG1LQ6UXU4 331 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 ZNF497Q6ZNH5 498 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 NCCRP1Q6ZVX7 275 aaPredicted RBP7.9□□□□□ -1.14
SMC1A-205ENST00000469129 GAPTQ8N292 157 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 ZNF565Q8N9K5 539 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 GRPEL2Q8TAA5 225 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 PPP1R35Q8TAP8 253 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 LRRC29Q8WV35 223 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TOMM40LQ969M1 308 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 ERGIC1Q969X5 290 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 CYYR1Q96J86 154 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 MEGF10Q96KG7 1140 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 HS3ST6Q96QI5 342 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TMEM246Q9BRR3 403 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 RTBDNQ9BSG5 229 aaPredicted RBP7.9□□□□□ -1.14
SMC1A-205ENST00000469129 SUCNR1Q9BXA5 334 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 ESRP2Q9H6T0 727 aaKnown RBP7.9□□□□□ -1.14
SMC1A-205ENST00000469129 SEBOXQ9HB31 216 aaPredicted RBP7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TMEM165Q9HC07 324 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 RAB18Q9NP72 206 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 PIPOXQ9P0Z9 390 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 TAAR3PQ9P1P4 343 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 OR14J1Q9UGF5 321 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 SLC23A1Q9UHI7 598 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 KCNIP3Q9Y2W7 256 aa7.9□□□□□ -1.14
SMC1A-205ENST00000469129 PRR14LQ5THK1 2151 aa7.89□□□□□ -1.15
SMC1A-205ENST00000469129 TEX13DA0A0J9YY54 714 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-205ENST00000469129 ZSCAN5BA6NJL1 495 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms