RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 COL27A1Q8IZC6 1860 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 NKX2-6A6NCS4 301 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 TRAPPC6AO75865 159 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 EDN3P14138 238 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 DAOP14920 347 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 WIPI1Q5MNZ9 446 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 PPP1R32Q7Z5V6 425 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 CA5BP1Q8WTZ4 195 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 ISOC2Q96AB3 205 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 MEGF10Q96KG7 1140 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 FAM24AA6NFZ4 105 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 UMAD1C9J7I0 102 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 MT-ND4LP03901 98 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 RNF212Q495C1 297 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 NCMAPQ5T1S8 102 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 UFSP2Q9NUQ7 469 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 PARPBPQ9NWS1 579 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 TCFL5Q9UL49 500 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 Q0VFX4 171 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 KRBOX4Q5JUW0 171 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 SSX9Q7RTT3 188 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 STX12Q86Y82 276 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 BOD1Q96IK1 185 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 PBDC1Q9BVG4 233 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 TRDCB7Z8K6 153 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 GNRHRP30968 328 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 PPP1CCP36873 323 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 CASP6P55212 293 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 DAZAP2Q15038 168 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 ABLIM2Q6H8Q1 611 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 C5orf24Q7Z6I8 188 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 DPPA2Q7Z7J5 298 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 SUMF1Q8NBK3 374 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 C14orf144Q96I85 54 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 GGACTQ9BVM4 153 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 KCNJ16Q9NPI9 418 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 SLC7A10Q9NS82 523 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 UBE2J1Q9Y385 318 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 DMRT1Q9Y5R6 373 aa13.59□□□□□ -0.23
TSPAN4-211ENST00000468468 A0A1W2PPH5 198 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 A6NLC8 198 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 SPIN3Q5JUX0 258 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 RIPPLY2Q5TAB7 128 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF561Q8N587 486 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 EXTL1Q92935 676 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 ADGRG7Q96K78 797 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 TECTBQ96PL2 329 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 RPL36A-HNRNPH2H7BZ11 118 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 CDS2O95674 445 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 LMO1P25800 156 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 CLDN15P56746 228 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 SRPXP78539 464 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF695Q8IW36 515 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 ABHD3Q8WU67 409 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 RFNGQ9Y644 331 aa13.58□□□□□ -0.24
TSPAN4-211ENST00000468468 SHANK1Q9Y566 2161 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 K7N7A8 449 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 MMP7P09237 267 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF883P0CG24 379 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 PMELP40967 661 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 C6orf15Q6UXA7 325 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM185AQ8N0U4 392 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF845Q96IR2 970 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM86C1Q9NVL1 165 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 LRRC3CA6NJW4 275 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNHIT1O43257 154 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF14P17017 642 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 OMGP23515 440 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 SPSB4Q96A44 273 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 TCEAL7Q9BRU2 100 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 C1QTNF5Q9BXJ0 243 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 C11orf1Q9H5F2 150 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 METTL1Q9UBP6 276 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 R4GN57 208 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 NCKAP5O14513 1909 aa13.57□□□□□ -0.24
TSPAN4-211ENST00000468468 F10P00742 488 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 JMJD7P0C870 316 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 BCL3P20749 454 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 LFNGQ8NES3 379 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 SLAMF9Q96A28 289 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 ARG1P05089 322 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms