RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CHST6Q9GZX3 395 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 DPAGT1Q9H3H5 408 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 DUSP21Q9H596 190 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 EXOSC4Q9NPD3 245 aaKnown RBP9.06□□□□□ -0.96
COL4A6-205ENST00000468338 PAK1IP1Q9NWT1 392 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-205ENST00000468338 IL36GQ9NZH8 169 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 ERGIC3Q9Y282 383 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 LSM2Q9Y333 95 aaKnown RBP9.06□□□□□ -0.96
COL4A6-205ENST00000468338 FAM96BQ9Y3D0 163 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 PCDHGB5Q9Y5G0 923 aa9.06□□□□□ -0.96
COL4A6-205ENST00000468338 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 TRAV8-7A0A075B6U6 113 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 A0A1W2PRD5 423 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 A0A1W2PRF3 423 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 A0A1W2PRM7 423 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 SLC33A1O00400 549 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-205ENST00000468338 MYL12BO14950 172 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 PIN1P1O15428 100 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 MAGEB3O15480 346 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 IGHV1-8P0DP01 117 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 CELP19835 753 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 GABRR1P24046 479 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 BDKRB2P30411 391 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF93P35789 620 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-205ENST00000468338 PTGFRP43088 359 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 P2RX3P56373 397 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 IL13RA2Q14627 380 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 AANATQ16613 207 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 NHLRC3Q5JS37 347 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 UNQ9370/PRO34162Q6UXP9 181 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 CDH26Q8IXH8 852 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 TPRX1Q8N7U7 411 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 C3orf56Q8N813 242 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 TNFAIP8L1Q8WVP5 186 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 SGCDQ92629 289 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 TAF15Q92804 592 aaKnown RBP eCLIP9.05□□□□□ -0.96
COL4A6-205ENST00000468338 ORAI1Q96D31 301 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF714Q96N38 554 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF747Q9BV97 191 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 C1RLQ9NZP8 487 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 FOXJ3Q9UPW0 622 aa9.05□□□□□ -0.96
COL4A6-205ENST00000468338 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-205ENST00000468338 TRAV24A0A0B4J272 114 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 FUOMA2VDF0 154 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 PTGES3LE9PB15 166 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 H0YHG0 523 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 SIRPB1O00241 398 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 DEGS1O15121 323 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 GPR137BO60478 399 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 CGB3P0DN86 165 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 CGB7P0DN87 165 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF44P15621 663 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 TGFBR2P37173 567 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 OR3A4PP47883 348 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 SNU13P55769 128 aaKnown RBP9.04□□□□□ -0.96
COL4A6-205ENST00000468338 PPP3R1P63098 170 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 GPR50Q13585 617 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 EDDM3AQ14507 147 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 CT83Q5H943 113 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 LDLRAD2Q5SZI1 272 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 DDI2Q5TDH0 399 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF626Q68DY1 528 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 ZNF782Q6ZMW2 699 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-205ENST00000468338 SATL1Q86VE3 508 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 OR5R1Q8NH85 324 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 MYDGFQ969H8 173 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 COQ2Q96H96 371 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 DERL3Q96Q80 235 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 OR14A2Q96R54 314 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 GPER1Q99527 375 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 MND1Q9BWT6 205 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 SCN3BQ9NY72 215 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 TAS2R3Q9NYW6 316 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 VPREB3Q9UKI3 123 aa9.04□□□□□ -0.96
COL4A6-205ENST00000468338 ODAMA1E959 279 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 MEX3AA1L020 520 aaKnown RBP9.03□□□□□ -0.96
COL4A6-205ENST00000468338 VGLL3A8MV65 326 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 SC5DO75845 299 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 MMP23AO75900 390 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 CDRT1O95170 752 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 PAHP00439 452 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 CD37P11049 281 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 MDKP21741 143 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-205ENST00000468338 CRHBPP24387 322 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 GLIPR1P48060 266 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
COL4A6-205ENST00000468338 AESQ08117 197 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 RSU1Q15404 277 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 SPHARQ15513 63 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 HEPN1Q6WQI6 88 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 GDPGP1Q6ZNW5 385 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 MS4A15Q8N5U1 240 aa9.03□□□□□ -0.96
COL4A6-205ENST00000468338 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1043.6 ms