RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KLHL12Q53G59 568 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 COA6Q5JTJ3 125 aaKnown RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 N4BP2L1Q5TBK1 243 aaPredicted RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 DGAT2L6Q6ZPD8 337 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 GLT6D1Q7Z4J2 308 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZNF589Q86UQ0 364 aaPredicted RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 NAA40Q86UY6 237 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZNF561Q8N587 486 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 Q8N7P7 452 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZNF676Q8N7Q3 588 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 OR10K1Q8NGX5 313 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 OR2G3Q8NGZ4 309 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 JOSD2Q8TAC2 188 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 GTSF1Q8WW33 167 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 LRRC58Q96CX6 371 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ACY3Q96HD9 319 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 CYYR1Q96J86 154 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 FAM19A4Q96LR4 140 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZNF717Q9BY31 904 aaPredicted RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 GABARAPL3Q9BY60 117 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 SLC25A39Q9BZJ4 359 aaPredicted RBP2.72□□□□□ -1.97
VPS50-209ENST00000467326 CHST5Q9GZS9 411 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ZBP1Q9H171 429 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 MIXL1Q9H2W2 232 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 OR51I2Q9H344 312 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 POMKQ9H5K3 350 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 TMEM138Q9NPI0 162 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 TMEM100Q9NV29 134 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 TAS2R1Q9NYW7 299 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 PCYOX1Q9UHG3 505 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 ENOPH1Q9UHY7 261 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 GLS2Q9UI32 602 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 RWDD2AQ9UIY3 292 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 UFC1Q9Y3C8 167 aa2.72□□□□□ -1.97
VPS50-209ENST00000467326 WDR7Q9Y4E6 1490 aa2.71□□□□□ -1.97
VPS50-209ENST00000467326 A0A087WUJ7 227 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 UQCRHLA0A096LP55 91 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 FAM183AA6NL82 134 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 K7EPK0 472 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 K7N7A8 449 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 GPR31O00270 319 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 NDUFA2O43678 99 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 CST8O60676 142 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 MED6O75586 246 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 LYPLA1O75608 230 aaPredicted RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 MT-CO2P00403 227 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SERPINA7P05543 415 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 IGKV5-2P06315 115 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 UQCRHP07919 91 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR4A8P0C604 315 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR5G3P0C626 314 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR10J4P0C629 311 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 C1GALT1C1LP0DN25 315 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 PSMB1P20618 241 aaKnown RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 CXCR1P25024 350 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 ELK4P28324 431 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 AQP1P29972 269 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 MIPP30301 263 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 APLNRP35414 380 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 TALDO1P37837 337 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR3A4PP47883 348 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 LGALS7P47929 136 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 H2BFSP57053 126 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 TAS2R46P59540 309 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 KRTAP10-8P60410 259 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 ESRRGP62508 458 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 CACNG7P62955 275 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SLC7A9P82251 487 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 NDPQ00604 133 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 IFITM3Q01628 133 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 IFITM2Q01629 132 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 C1DQ13901 141 aaKnown RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 FZD2Q14332 565 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 PAFAH1B3Q15102 231 aaKnown RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 SHHQ15465 462 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 ZNF630Q2M218 657 aaPredicted RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 ACOT6Q3I5F7 207 aaPredicted RBP2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR2B11Q5JQS5 317 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 ZNF684Q5T5D7 378 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 FAM78BQ5VT40 261 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 TEX36Q5VZQ5 186 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 LCN12Q6JVE5 192 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 CLEC19AQ6UXS0 136 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SCGB1D4Q6XE38 83 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 IDO2Q6ZQW0 420 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 GRINAQ7Z429 371 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 UBALD2Q8IYN6 164 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 TMEM252Q8N6L7 170 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR13D1Q8NGV5 346 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 OR10D3Q8NH80 312 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 TMEM159Q96B96 161 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SMARCD1Q96GM5 515 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SMIM8Q96KF7 97 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 FAM210BQ96KR6 192 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 GPER1Q99527 375 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 EBF4Q9BQW3 602 aa2.71□□□□□ -1.98
VPS50-209ENST00000467326 SFXN3Q9BWM7 321 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms