RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SSX7Q7RTT5 188 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 OLIG3Q7RTU3 272 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 IQCF2Q8IXL9 164 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 OR1P1Q8NH06 330 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 OLFM3Q96PB7 478 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF251Q9BRH9 671 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 OR51E2Q9H255 320 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 C1orf109Q9NX04 203 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
VPS13A-209ENST00000467124 C15orf41Q9Y2V0 281 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 COL27A1Q8IZC6 1860 aaPredicted RBP2.3□□□□□ -2.04
VPS13A-209ENST00000467124 EIF4G1Q04637 1599 aaKnown RBP2.29□□□□□ -2.04
VPS13A-209ENST00000467124 FAM183AA6NL82 134 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 CD300LBA8K4G0 201 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 C9J4A7 227 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 K7EPK0 472 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 KCNK2O95069 426 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 GTF2F2P13984 249 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 PSMB6P28072 239 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 ADORA1P30542 326 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 ACTR1BP42025 376 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 CLDN12P56749 244 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 RAB8AP61006 207 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 RAB2AP61019 212 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF235Q14590 738 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 TMEM249Q2WGJ8 235 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 LDLRAD2Q5SZI1 272 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 CD302Q8IX05 232 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 OR4C13Q8NGP0 309 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 KLF14Q8TD94 323 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-209ENST00000467124 OTUB2Q96DC9 234 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 SHANK2-AS3Q9BTD1 123 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 POTEKPQ9BYX7 375 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 DMAC2Q9NW81 257 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 NAGKQ9UJ70 344 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
VPS13A-209ENST00000467124 GPR179Q6PRD1 2367 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 IGHV2-26A0A0B4J1V2 119 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 C1orf232A0A0U1RR37 186 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 A6NED7 52 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 PSIP1O75475 530 aaKnown RBP2.28□□□□□ -2.04
VPS13A-209ENST00000467124 EPPINO95925 133 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 IGKV1D-33P01593 117 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 IGKV1-33P01594 117 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 PFN1P07737 140 aaKnown RBP2.28□□□□□ -2.04
VPS13A-209ENST00000467124 GABRA1P14867 456 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 AKR1C4P17516 323 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 CELP19835 753 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 RCVRNP35243 200 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 DEFA6Q01524 100 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 COTL1Q14019 142 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 TIMM23BQ5SRD1 257 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 FAM104BQ5XKR9 115 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 CLEC18BQ6UXF7 455 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 TCF23Q7RTU1 214 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 AMN1Q8IY45 258 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 ZFP82Q8N141 532 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 ZIC4Q8N9L1 334 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 OR11L1Q8NGX0 322 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 ZNRF2Q8NHG8 242 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 DEDD2Q8WXF8 326 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 GPR22Q99680 433 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 C1orf50Q9BV19 199 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 GABARAPL1Q9H0R8 117 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 RHOFQ9HBH0 211 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 INIPQ9NRY2 104 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 MARCOQ9UEW3 520 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-209ENST00000467124 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
VPS13A-209ENST00000467124 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.05
VPS13A-209ENST00000467124 VWA8A3KMH1 1905 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 IGKV1OR2-108A0A075B7D4 117 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 IGLL5B9A064 214 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 F5H5P2 479 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 K7ERS5 55 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 FGF16O43320 207 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 COCHO43405 550 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF35P13682 527 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 ATF1P18846 271 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 PRPS1L1P21108 318 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 HLA-DMAP28067 261 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 DLX6P56179 175 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 MP68P56378 58 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 KLF3P57682 345 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-209ENST00000467124 IL15RAQ13261 267 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 GOLGA7BQ2TAP0 167 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 TMEM69Q5SWH9 247 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 NIPAL1Q6NVV3 410 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 SPINT4Q6UDR6 99 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 RIBC1Q8N443 379 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-209ENST00000467124 OR4A5Q8NH83 315 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 OR5AK3PQ8NH89 298 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 CASTOR1Q8WTX7 329 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 REEP6Q96HR9 211 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 DCUN1D5Q9BTE7 237 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 TXNIPQ9H3M7 391 aa2.27□□□□□ -2.05
VPS13A-209ENST00000467124 METTL8Q9H825 291 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms