RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PPOXP50336 477 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 DLX1P56177 255 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 RAE1P78406 368 aaKnown RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 GLDNQ6ZMI3 551 aaPredicted RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 MUC20Q8N307 709 aaPredicted RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 MUC15Q8N387 334 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 NUBPLQ8TB37 319 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 YIPF6Q96EC8 236 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 GOLGA4Q13439 2230 aaKnown RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 CTSVO60911 334 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 P01737 135 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 SLC6A1P30531 599 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 ZFP36L2P47974 494 aaKnown RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 CAMPP49913 170 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 C10orf113Q5VZT2 155 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 GGNBP1Q5YKI7 109 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 ZNF66Q6ZN08 573 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 C16orf47Q6ZP98 133 aaPredicted RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 STARD10Q9Y365 291 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 ZNF638Q14966 1978 aaKnown RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 A0A1W2PQF6 199 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 M0R2Z0 102 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 PMELP40967 661 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 C19orf57Q0VDD7 668 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 KHDC3LQ587J8 217 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 C12orf73Q69YU5 71 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 DEGS2Q6QHC5 323 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 HSD17B13Q7Z5P4 300 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 IL22RA2Q969J5 263 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 PIPOXQ9P0Z9 390 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 MMP24Q9Y5R2 645 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 G6PCP35575 357 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 TGFBR1P36897 503 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 ACAA2P42765 397 aaKnown RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 SULT1A1P50225 295 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 LINC00299Q6ZSB3 139 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 C16orf82Q7Z2V1 217 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 FAM219AQ8IW50 185 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 ZNF275Q9NSD4 429 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 ANXA10Q9UJ72 324 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 TRIP12Q14669 1992 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 ROM1Q03395 351 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 OR8I2Q8N0Y5 310 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 TCTEX1D1Q8N7M0 179 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 GMPPAQ96IJ6 420 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 MAP6Q96JE9 813 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 MSL2Q9HCI7 577 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 SLC25A10Q9UBX3 287 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 MFSD2BA6NFX1 497 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 NQO2P16083 231 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 FGF8P55075 233 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 TMEM183BQ1AE95 376 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 AMER3Q8N944 861 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 OR8B12Q8NGG6 310 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 MYOZ3Q8TDC0 251 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 HARBI1Q96MB7 349 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 CHODLQ9H9P2 273 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 PILRBQ9UKJ0 227 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 C9orf170A2RU37 121 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 HELTA6NFD8 242 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 PRSS44E7EML9 344 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 DYNLT3P51808 116 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 COL19A1Q14993 1142 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 FAM27D1Q5T7N8 215 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 GPX7Q96SL4 187 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 RHNO1Q9BSD3 238 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 CNTD2Q9H8S5 307 aa7.67□□□□□ -1.18
HPS4-209ENST00000466781 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
HPS4-209ENST00000466781 APELAP0DMC3 54 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 INO80CQ6PI98 192 aaPredicted RBP7.66□□□□□ -1.18
HPS4-209ENST00000466781 SYT8Q8NBV8 401 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 OIT3Q8WWZ8 545 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 FGF11Q92914 225 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 RASL10BQ96S79 203 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 MIEN1Q9BRT3 115 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 GHITMQ9H3K2 345 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 GOLGB1Q14789 3259 aaKnown RBP7.66□□□□□ -1.18
HPS4-209ENST00000466781 SS18L1O75177 396 aaPredicted RBP7.66□□□□□ -1.18
HPS4-209ENST00000466781 CSN3P07498 182 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 CCL4P13236 92 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 HLA-GP17693 338 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 MMDQ15546 238 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 FAM78BQ5VT40 261 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 OR4X1Q8NH49 305 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 SNRNP40Q96DI7 357 aaKnown RBP7.66□□□□□ -1.18
HPS4-209ENST00000466781 MAP1LC3CQ9BXW4 147 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 GPR27Q9NS67 375 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 MFNGO00587 321 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 MELTFP08582 738 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 SMIM18P0DKX4 95 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 CLDN18P56856 261 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 PSG5Q15238 335 aa7.66□□□□□ -1.18
HPS4-209ENST00000466781 NFAM1Q8NET5 270 aaPredicted RBP7.66□□□□□ -1.18
HPS4-209ENST00000466781 TMEM37Q8WXS4 190 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms