RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MYDGFQ969H8 173 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 KIRREL1Q96J84 757 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 NR1H4Q96RI1 486 aaPredicted RBP15.27■□□□□ 0.04
COL9A3-206ENST00000466532 PDCD1LG2Q9BQ51 273 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 DHDHQ9UQ10 334 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 KBTBD11-OT1A0A1B0GTJ5 212 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 OOSP1A8MZH6 123 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 PF4P02776 101 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 AMY1AP04745 511 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 AMY2AP04746 511 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 CCDC159P0C7I6 412 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 GLP1RP43220 463 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 PAN3Q58A45 887 aaKnown RBP15.26■□□□□ 0.03
COL9A3-206ENST00000466532 C9orf152Q5JTZ5 239 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 ZFP1Q6P2D0 407 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 OR51T1Q8NGJ9 327 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 OR9G1Q8NH87 305 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 OR5AK2Q8NH90 309 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 AMBNQ9NP70 447 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 ERVK13-1Q9NX77 482 aa15.26■□□□□ 0.03
COL9A3-206ENST00000466532 MEIKINA0A087WXM9 373 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 E9PI62 339 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 M0QZK8 103 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 FADS2O95864 444 aaKnown RBP15.25■□□□□ 0.03
COL9A3-206ENST00000466532 CGB3P0DN86 165 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 CGB7P0DN87 165 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 GBX2P52951 348 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-206ENST00000466532 MRPL28Q13084 256 aaKnown RBP15.25■□□□□ 0.03
COL9A3-206ENST00000466532 ZSCAN26Q16670 478 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 KHDC1LQ5JSQ8 128 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 ELP2Q6IA86 826 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 ZNF565Q8N9K5 539 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 PXT1Q8NFP0 134 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 TOMM40LQ969M1 308 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 RPEQ96AT9 228 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 CPNE2Q96FN4 548 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-206ENST00000466532 Q96MT0 163 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 GPER1Q99527 375 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 ZNF649Q9BS31 505 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 INPP5EQ9NRR6 644 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 CALYQ9NYX4 217 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 KIF25Q9UIL4 384 aa15.25■□□□□ 0.03
COL9A3-206ENST00000466532 AMMECR1Q9Y4X0 333 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-206ENST00000466532 GABRPO00591 440 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 MAGEB3O15480 346 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 MPZL2O60487 215 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 FAM106CPP0CH98 169 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 RAB3AP20336 220 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 SLC35A2P78381 396 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 SATL1Q86VE3 508 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 OR13A1Q8NGR1 328 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 CNIH3Q8TBE1 160 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 TNFAIP8L1Q8WVP5 186 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 BARHL1Q9BZE3 327 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 MOB4Q9Y3A3 225 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 HSPE1-MOB4S4R3N1 261 aa15.24■□□□□ 0.03
COL9A3-206ENST00000466532 TRAV24A0A0B4J272 114 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 J3QR06 171 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 IGHV3-7P01780 117 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 SNRNP70P08621 437 aaKnown RBP15.23■□□□□ 0.03
COL9A3-206ENST00000466532 C21orf33P30042 268 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-206ENST00000466532 RAB40BQ12829 278 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 IL13RA2Q14627 380 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 OR51A2Q8NGJ7 313 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 OR52I1Q8NGK6 324 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 RHOXF1Q8NHV9 184 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 LEAP2Q969E1 77 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 FAM192AQ9GZU8 254 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 NCOR1P1Q9H4R4 102 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 PCDHB16Q9NRJ7 776 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 IDI2-AS1Q9NZ38 188 aa15.23■□□□□ 0.03
COL9A3-206ENST00000466532 MPIG6BO95866 241 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 IL1AP01583 271 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 SOX2P48431 317 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 RSU1Q15404 277 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 LTC4SQ16873 150 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 PIGYQ3MUY2 71 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 THNSL2Q86YJ6 484 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 OSR2Q8N2R0 312 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 OR10K1Q8NGX5 313 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 OR56B4Q8NH76 319 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 PLPPR1Q8TBJ4 325 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 MRGPRDQ8TDS7 321 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 C9orf16Q9BUW7 83 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 JAM3Q9BX67 310 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 TAS2R4Q9NYW5 299 aa15.22■□□□□ 0.03
COL9A3-206ENST00000466532 PSMB11A5LHX3 300 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A18PA6NE21 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A16PA6NEW6 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A20PA6NIJ5 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A9PA6NNJ1 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A12PA8MX19 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A5PA8MXJ8 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 CLIC3O95833 236 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A15PP0C7V4 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A13PP0C7W8 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A14PP0C7W9 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 FAM90A24PP0C7X0 464 aa15.21■□□□□ 0.03
COL9A3-206ENST00000466532 GNG10P50151 68 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms