RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CEACAM8P31997 349 aaPredicted RBP11.49□□□□□ -0.57
UBE4B-206ENST00000466379 HERV-K104P61576 105 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 FAM27E3Q08E93 113 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 ZNF718Q3SXZ3 478 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 DOLPP1Q86YN1 238 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 PRR7Q8TB68 274 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 NRIP2Q9BQI9 281 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 BCL2L14Q9BZR8 327 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 SPACA1Q9HBV2 294 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 SLC2A9Q9NRM0 540 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 UFSP2Q9NUQ7 469 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 MAB21L2Q9Y586 359 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 RNF222A6NCQ9 220 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 SLC34A2O95436 690 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 TFF1P04155 84 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 OR5AC1P0C628 307 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 FAM87AP0C7U9 286 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 PSMB6P28072 239 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 GCH1P30793 250 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 ALKAL2Q6UX46 152 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 C22orf34Q6ZV56 151 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 THAP6Q8TBB0 222 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 VRK1Q99986 396 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 NMES1Q9C002 83 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 GSKIPQ9P0R6 139 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 OR14J1Q9UGF5 321 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 MSRB2Q9Y3D2 182 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 RP1L1Q8IWN7 2480 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 RPS10-NUDT3A0A1W2PQS6 291 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 A6NLC8 198 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 TRDCB7Z8K6 153 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 SLC33A1O00400 549 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 SPDEFO95238 335 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 KITLGP21583 273 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 RBM39Q14498 530 aaKnown RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 PAN3Q58A45 887 aaKnown RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 TMEM65Q6PI78 240 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 UNQ6126/PRO20091Q6UXV3 157 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 Q6ZS49 121 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 IQCF2Q8IXL9 164 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 C11orf53Q8IXP5 236 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 PLPPR1Q8TBJ4 325 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
UBE4B-206ENST00000466379 GPHA2Q96T91 129 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 DHRS9Q9BPW9 319 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 NAA60Q9H7X0 242 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
UBE4B-206ENST00000466379 TMEM210A6NLX4 147 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 H0YIZ8 118 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 EIF2S3LQ2VIR3 472 aaKnown RBP11.47□□□□□ -0.57
UBE4B-206ENST00000466379 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 UBALD1Q8TB05 177 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 SECTM1Q8WVN6 248 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 DCUN1D4Q92564 292 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 CXXC4Q9H2H0 198 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 DUSP13Q9UII6 198 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
UBE4B-206ENST00000466379 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.47□□□□□ -0.57
UBE4B-206ENST00000466379 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 PRRG2O14669 202 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 MBNL2Q5VZF2 373 aaKnown RBP11.47□□□□□ -0.57
UBE4B-206ENST00000466379 RGS7BPQ6MZT1 257 aaPredicted RBP11.47□□□□□ -0.57
UBE4B-206ENST00000466379 ZGRF1Q86YA3 2104 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 SLC38A6Q8IZM9 456 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 PIK3IP1Q96FE7 263 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 C2orf50Q96LR7 162 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 RSRP1Q9BUV0 290 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 Q9UFV3 132 aa11.47□□□□□ -0.57
UBE4B-206ENST00000466379 KIR2DS1A0A191URI9 304 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 SNAPC5O75971 98 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 TK1P04183 234 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 KIR2DS4P43632 304 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 RAB32Q13637 225 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 TMEM187Q14656 261 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 KIR2DS1Q14954 304 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 FOXRED2Q8IWF2 684 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 Q8IYB0 196 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 SNRNP40Q96DI7 357 aaKnown RBP11.46□□□□□ -0.57
UBE4B-206ENST00000466379 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 ASF1BQ9NVP2 202 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 OR5AC2Q9NZP5 309 aa11.46□□□□□ -0.57
UBE4B-206ENST00000466379 A8MXE2 369 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 DIRAS3O95661 229 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 GNRHRP30968 328 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms