RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
SKA3-205ENST00000465471 SUCNR1Q9BXA5 334 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 MS4A7Q9GZW8 240 aaPredicted RBP16.63■□□□□ 0.25
SKA3-205ENST00000465471 OR51E2Q9H255 320 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 UBE2J1Q9Y385 318 aaPredicted RBP16.63■□□□□ 0.25
SKA3-205ENST00000465471 V9GY05 133 aa16.63■□□□□ 0.25
SKA3-205ENST00000465471 HSPB6O14558 160 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 PDCD5O14737 125 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 TCF21O43680 179 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 SMIM18P0DKX4 95 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 MYL9P24844 172 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 PSMD7P51665 324 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 HILS1P60008 231 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 GUCA2AQ02747 115 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 KLRD1Q13241 179 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 KRBOX4Q5JUW0 171 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 RSBN1Q5VWQ0 802 aaPredicted RBP16.62■□□□□ 0.25
SKA3-205ENST00000465471 RUSC1-AS1Q66K80 236 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 PLPPR1Q8TBJ4 325 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 ZNF418Q8TF45 676 aaPredicted RBP16.62■□□□□ 0.25
SKA3-205ENST00000465471 FAM46BQ96A09 425 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 ZNF714Q96N38 554 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 SELENOIQ9C0D9 397 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 KCNK15Q9H427 330 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 PRDM13Q9H4Q3 707 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 OCEL1Q9H607 264 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 PLGRKTQ9HBL7 147 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 SPACA1Q9HBV2 294 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 VCX3AQ9NNX9 186 aa16.62■□□□□ 0.25
SKA3-205ENST00000465471 SOX21Q9Y651 276 aaPredicted RBP16.62■□□□□ 0.25
SKA3-205ENST00000465471 MEX3AA1L020 520 aaKnown RBP16.61■□□□□ 0.25
SKA3-205ENST00000465471 CD36P16671 472 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 GADD45AP24522 165 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 UBE2E1P51965 193 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 ERVFRD-1P60508 538 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 RPS27AP62979 156 aaKnown RBP16.61■□□□□ 0.25
SKA3-205ENST00000465471 PRB3Q04118 309 aaPredicted RBP16.61■□□□□ 0.25
SKA3-205ENST00000465471 RAB11BQ15907 218 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 OR10K2Q6IF99 312 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 NR2C2APQ86WQ0 139 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 KCNG3Q8TAE7 436 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 TM2D1Q9BX74 207 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 FBLN5Q9UBX5 448 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 SSR3Q9UNL2 185 aa16.61■□□□□ 0.25
SKA3-205ENST00000465471 FBN1P35555 2871 aaKnown RBP16.61■□□□□ 0.25
SKA3-205ENST00000465471 hCG_1809904A0A1W2PP81 198 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 A0A1W2PPE2 198 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 A0A1W2PR64 198 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 A0A1W2PRV1 198 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 LDLRAD4O15165 306 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 MPIG6BO95866 241 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 CGB3P0DN86 165 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 CGB7P0DN87 165 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 OR10A3P58181 314 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 P2RY14Q15391 338 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 OR2W3Q7Z3T1 314 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 PDZD9Q8IXQ8 264 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 YIPF6Q96EC8 236 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 TMEM59Q9BXS4 323 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 TAS2R3Q9NYW6 316 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 KIAA2026Q5HYC2 2103 aa16.6■□□□□ 0.25
SKA3-205ENST00000465471 TRGV10A0A0A0MS01 117 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 IFITM5A6NNB3 132 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 VENTXO95231 258 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 IGHV1-8P0DP01 117 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 ARSBP15848 533 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 RAB3BP20337 219 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 ATAD3CQ5T2N8 411 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 SLC35E4Q6ICL7 350 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 SIGLECL1Q8N7X8 197 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 CHCHD6Q9BRQ6 235 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 BARHL1Q9BZE3 327 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 OR6C3Q9NZP0 311 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 STEAP1Q9UHE8 339 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 KIF25Q9UIL4 384 aa16.59■□□□□ 0.25
SKA3-205ENST00000465471 NPFFO15130 113 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 PDCD6O75340 191 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 CLPXO76031 633 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 GLAP06280 429 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 RANBP1P43487 201 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 CLDN12P56749 244 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 DEFB112Q30KQ8 113 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 RAB12Q6IQ22 244 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 TPRA1Q86W33 373 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 GAPTQ8N292 157 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 FAM3DQ96BQ1 224 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 KCTD7Q96MP8 289 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 GAL3ST2Q9H3Q3 398 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 HEXA-AS1Q9H8Q6 139 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 LINC00574Q9H8X3 128 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 ESM1Q9NQ30 184 aa16.58■□□□□ 0.24
SKA3-205ENST00000465471 MEIKINA0A087WXM9 373 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 A0A0A6YYD4 124 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 A0A0U1RQK1 487 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 MDFIC2A0A1B0GVS7 189 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 ZNF729A6NN14 1252 aaPredicted RBP16.57■□□□□ 0.24
SKA3-205ENST00000465471 H3BUI4 141 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 AIPO00170 330 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms