RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
SQSTM1-205ENST00000464493 TRGV10A0A0A0MS01 117 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 ODAMA1E959 279 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A10PA6NDY2 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A18PA6NE21 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A16PA6NEW6 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A20PA6NIJ5 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A8PA6NJQ4 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A7PA6NKC0 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A22PA8MWA6 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A12PA8MX19 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A5PA8MXJ8 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A23PA8MXZ1 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 BPNT1O95861 308 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 MPIG6BO95866 241 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 RBP4P02753 201 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A15PP0C7V4 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A13PP0C7W8 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A14PP0C7W9 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM90A24PP0C7X0 464 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 RANBP1P43487 201 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 UBE2E1P51965 193 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 KLRD1Q13241 179 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 RAB11BQ15907 218 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 OR10K2Q6IF99 312 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 TRAPPC6BQ86SZ2 158 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 CORO2AQ92828 525 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 Q96M66 194 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 OR51E2Q9H255 320 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 HEXA-AS1Q9H8Q6 139 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
SQSTM1-205ENST00000464493 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 ARSBP15848 533 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 JUNBP17275 347 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 RAB3BP20337 219 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 GADD45AP24522 165 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 QRFPP83859 136 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 PAX5Q02548 391 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 P2RY14Q15391 338 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 SIGLECL1Q8N7X8 197 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 ZNF48Q96MX3 618 aaPredicted RBP11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 CHCHD6Q9BRQ6 235 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 NCOR1P1Q9H4R4 102 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
SQSTM1-205ENST00000464493 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 A0A1W2PRD5 423 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 A0A1W2PRF3 423 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 A0A1W2PRM7 423 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 H3BUI4 141 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 VENTXO95231 258 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 FUT3P21217 361 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 CLDN12P56749 244 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 OR10A3P58181 314 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 HILS1P60008 231 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 RPS27AP62979 156 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 SRSF2Q01130 221 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 UNC119Q13432 240 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 RBM39Q14498 530 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 HES5Q5TA89 166 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 RSBN1Q5VWQ0 802 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 ZNF782Q6ZMW2 699 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 NEK7Q8TDX7 302 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 KCTD7Q96MP8 289 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 GAL3ST2Q9H3Q3 398 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 KCNK15Q9H427 330 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 STEAP1Q9UHE8 339 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 KIF25Q9UIL4 384 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 PEX16Q9Y5Y5 336 aa11.86□□□□□ -0.51
SQSTM1-205ENST00000464493 FBN1P35555 2871 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 IFITM5A6NNB3 132 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 NPFFO15130 113 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 DEFB112Q30KQ8 113 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 C2orf76Q3KRA6 126 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 SIGIRRQ6IA17 410 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 SLC35E4Q6ICL7 350 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 OR2W3Q7Z3T1 314 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 PNKDQ8N490 385 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 OR51D1Q8NGF3 324 aa11.85□□□□□ -0.51
SQSTM1-205ENST00000464493 FAM3DQ96BQ1 224 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms