RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ESDP10768 282 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 MYL12AP19105 171 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 RAB3AP20336 220 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 COX7A1P24310 79 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 SERPINB1P30740 379 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 MPIP34949 423 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 POLR2IP36954 125 aaKnown RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 CDK9P50750 372 aaKnown RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 MNAT1P51948 309 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 CXCL6P80162 114 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 PSG4Q00888 419 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 EDDM3AQ14507 147 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 HERPUD1Q15011 391 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 PMVKQ15126 192 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 RBMY1FQ15415 496 aaKnown RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 C6orf99Q4VX62 202 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 SPATA31B1PQ5VZV4 182 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 OLIG3Q7RTU3 272 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 SLC36A1Q7Z2H8 476 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 GLT6D1Q7Z4J2 308 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 NAA40Q86UY6 237 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 CADM2Q8N3J6 435 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 ZNF676Q8N7Q3 588 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 OR1L8Q8NGR8 309 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 OR10J5Q8NHC4 309 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 CYGBQ8WWM9 190 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 CCL17Q92583 94 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 GALNT14Q96FL9 552 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 VSIG2Q96IQ7 327 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 SMIM8Q96KF7 97 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 OR52B2Q96RD2 323 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 EBF4Q9BQW3 602 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 RTBDNQ9BSG5 229 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 SLC25A39Q9BZJ4 359 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 C6orf62Q9GZU0 229 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 PLSCR3Q9NRY6 295 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 DDX19AQ9NUU7 478 aaKnown RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 TAS2R5Q9NYW4 299 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 DKKL1Q9UK85 242 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 PSG8Q9UQ74 426 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 POLR1DQ9Y2S0 133 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 LSM5Q9Y4Y9 91 aaKnown RBP2.72□□□□□ -1.97
ITGB1-208ENST00000464001 NUP155O75694 1391 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 MTUS2Q5JR59 1369 aa2.72□□□□□ -1.97
ITGB1-208ENST00000464001 DOCK6Q96HP0 2047 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
ITGB1-208ENST00000464001 IGLV8-61A0A075B6I0 122 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 TRAV8-2A0A0B4J237 113 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 IGHV1-69DA0A0B4J2H0 117 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 IGHV3-35A0A0C4DH35 117 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 PDCD6O75340 191 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 EPPINO95925 133 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 CD36P16671 472 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 ELK4P28324 431 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 MIPP30301 263 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 OR3A4PP47883 348 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 ZNF133P52736 654 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-208ENST00000464001 RAB25P57735 213 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SLC35A2P78381 396 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 TFAMQ00059 246 aaKnown RBP2.71□□□□□ -1.98
ITGB1-208ENST00000464001 RUNX1Q01196 453 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 LAMTOR4Q0VGL1 99 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 LIN52Q52LA3 116 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 TRMT12Q53H54 448 aaKnown RBP2.71□□□□□ -1.98
ITGB1-208ENST00000464001 LRRC10Q5BKY1 277 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 ZNF684Q5T5D7 378 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 FAM162BQ5T6X4 162 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 HIST2H3PS2Q5TEC6 136 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 FAM71E1Q6IPT2 247 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 CLEC19AQ6UXS0 136 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SPNS3Q6ZMD2 512 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 GALNT10Q86SR1 603 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SLC35F6Q8N357 371 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SMIM20Q8N5G0 67 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 LINC00337Q8N6G1 96 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 OR4S2Q8NH73 311 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 OR10D3Q8NH80 312 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 OR1S1Q8NH92 325 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 MFSD8Q8NHS3 518 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 RXFP4Q8TDU9 374 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 DYDC1Q8WWB3 177 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 FXYD5Q96DB9 178 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SEH1LQ96EE3 360 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SMARCD1Q96GM5 515 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 CEP170P1Q96L14 293 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 TMEM243Q9BU79 118 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 OR11A1Q9GZK7 315 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SLC25A31Q9H0C2 315 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 PTGES2Q9H7Z7 377 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 RBM12B-AS1Q9P1G2 102 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 GINS2Q9Y248 185 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 ERGIC3Q9Y282 383 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 FLVCR1Q9Y5Y0 555 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 HEBP2Q9Y5Z4 205 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 LOXHD1Q8IVV2 1947 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 PALLDQ8WX93 1383 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 SCN2AQ99250 2005 aa2.71□□□□□ -1.98
ITGB1-208ENST00000464001 TRIP11Q15643 1979 aa2.7□□□□□ -1.98
ITGB1-208ENST00000464001 ZBED9Q6R2W3 1325 aa2.7□□□□□ -1.98
ITGB1-208ENST00000464001 NCOA1Q15788 1441 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms