RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ATXN7L3Q14CW9 347 aaPredicted RBP11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 CCDC58Q4VC31 144 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 LPCAT4Q643R3 524 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 ASCL4Q6XD76 172 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 OR52I1Q8NGK6 324 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 TSEN15Q8WW01 171 aaKnown RBP11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 RBM14Q96PK6 669 aaKnown RBP11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 SLC29A1Q99808 456 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 PDCD1LG2Q9BQ51 273 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 PCDHB16Q9NRJ7 776 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 FAM118AQ9NWS6 357 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 TRAV24A0A0B4J272 114 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 H0YJX3 145 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 LIMS3P0CW19 117 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 LIMS4P0CW20 117 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 CD24P25063 80 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 MNDAP41218 407 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 PAN3Q58A45 887 aaKnown RBP11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 CENPVQ7Z7K6 275 aaPredicted RBP11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 THNSL2Q86YJ6 484 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 OR9G1Q8NH87 305 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 CNIH3Q8TBE1 160 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 PPIL3Q9H2H8 161 aaKnown RBP11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 S100A14Q9HCY8 104 aa11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
SNRNP40-203ENST00000463988 FAM172BPA6NC97 362 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 GABRPO00591 440 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 AMY1AP04745 511 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 AMY2AP04746 511 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 CD2P06729 351 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 FAM106CPP0CH98 169 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 C21orf33P30042 268 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 ABCA11PQ4W5N1 156 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 RPL22L1Q6P5R6 122 aaKnown RBP11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 PQLC1Q8N2U9 271 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 OR10A7Q8NGE5 316 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 TNFAIP8L1Q8WVP5 186 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 APH1BQ8WW43 257 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 GPER1Q99527 375 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 NECAP2Q9NVZ3 263 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 ING3Q9NXR8 418 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 KIF25Q9UIL4 384 aa11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 AMMECR1Q9Y4X0 333 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-203ENST00000463988 MEIKINA0A087WXM9 373 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A18PA6NE21 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A16PA6NEW6 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A20PA6NIJ5 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A9PA6NNJ1 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A12PA8MX19 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A5PA8MXJ8 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 IL1AP01583 271 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 LPLP06858 475 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A15PP0C7V4 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A13PP0C7W8 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A14PP0C7W9 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 FAM90A24PP0C7X0 464 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 NFYBP25208 207 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 DCKP27707 260 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 GLP1RP43220 463 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 OR3A4PP47883 348 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 GTF2A1P52655 376 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 RSU1Q15404 277 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 TCTEX1D4Q5JR98 221 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 NHLRC3Q5JS37 347 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 RSBN1Q5VWQ0 802 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 Q6ZPA2 131 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 OR51A2Q8NGJ7 313 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 RPEQ96AT9 228 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 NR1H4Q96RI1 486 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 IL36GQ9NZH8 169 aa11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 TSSC4Q9Y5U2 329 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-203ENST00000463988 IRGMA1A4Y4 181 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 J3QR06 171 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 SOX2P48431 317 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 RBM39Q14498 530 aaKnown RBP11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 ZSCAN26Q16670 478 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 UTF1Q5T230 341 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 TMPRSS11AQ6ZMR5 421 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 SATL1Q86VE3 508 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 OR4X2Q8NGF9 303 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 TMEM106AQ96A25 262 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 TMEM138Q9NPI0 162 aa11.44□□□□□ -0.58
SNRNP40-203ENST00000463988 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms