RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 RSBN1Q5VWQ0 802 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 AWAT2Q6E213 333 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 ZNF782Q6ZMW2 699 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 SUMF2Q8NBJ7 301 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 FAM216AQ8WUB2 273 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 FOXRED1Q96CU9 486 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 DUX5Q96PT3 197 aa14.41□□□□□ -0.1
VPS52-214ENST00000463486 DPCDQ9BVM2 203 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 RCC2Q9P258 522 aaKnown RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 UBE2J1Q9Y385 318 aaPredicted RBP14.41□□□□□ -0.1
VPS52-214ENST00000463486 TRDV1A0A1B0GX56 115 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 ARL6IP5O75915 188 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 OR7C1O76099 320 aaPredicted RBP14.4□□□□□ -0.1
VPS52-214ENST00000463486 VSIG8P0DPA2 414 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 CALRP27797 417 aaKnown RBP14.4□□□□□ -0.1
VPS52-214ENST00000463486 MPV17LQ2QL34 196 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 KRBOX4Q5JUW0 171 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 LDLRAD2Q5SZI1 272 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 SYT6Q5T7P8 510 aaPredicted RBP14.4□□□□□ -0.1
VPS52-214ENST00000463486 GLT8D1Q68CQ7 371 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 SIGIRRQ6IA17 410 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 RBMS3Q6XE24 437 aaKnown RBP14.4□□□□□ -0.1
VPS52-214ENST00000463486 LDLRAD3Q86YD5 345 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 FCGR1BQ92637 280 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 Q96M66 194 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 BANF2Q9H503 90 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 HEXA-AS1Q9H8Q6 139 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 PCDHB16Q9NRJ7 776 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 GHRLQ9UBU3 117 aa14.4□□□□□ -0.1
VPS52-214ENST00000463486 hCG_1809904A0A1W2PP81 198 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 A0A1W2PPE2 198 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 A0A1W2PR64 198 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 A0A1W2PRV1 198 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A8PA6NJQ4 464 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 ODF3BA8MYP8 253 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 CCRL2O00421 344 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 HSPB6O14558 160 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 HOXA3O43365 443 aaPredicted RBP14.39□□□□□ -0.11
VPS52-214ENST00000463486 RNASE1P07998 156 aaKnown RBP14.39□□□□□ -0.11
VPS52-214ENST00000463486 MGMTP16455 207 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 GALP22466 123 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 GDNFP39905 211 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 C17orf58Q2M2W7 97 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 MIDNQ504T8 468 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 OR10K2Q6IF99 312 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 BRICD5Q6PL45 260 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 OR11H6Q8NGC7 330 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 LINC00574Q9H8X3 128 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 TAS2R3Q9NYW6 316 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 KIF25Q9UIL4 384 aa14.39□□□□□ -0.11
VPS52-214ENST00000463486 AK6Q9Y3D8 172 aaKnown RBP14.39□□□□□ -0.11
VPS52-214ENST00000463486 TRAV1-2A0A0B4J238 106 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 MEIOCA2RUB1 952 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FUOMA2VDF0 154 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A10PA6NDY2 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A18PA6NE21 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A16PA6NEW6 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A20PA6NIJ5 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A7PA6NKC0 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A22PA8MWA6 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A12PA8MX19 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A5PA8MXJ8 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A23PA8MXZ1 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 TRIM77I1YAP6 450 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A15PP0C7V4 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A13PP0C7W8 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A14PP0C7W9 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 FAM90A24PP0C7X0 464 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 UBBP0CG47 229 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 PSMB9P28065 219 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 HTR2CP28335 458 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 IER3P46695 156 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 KCNJ3P48549 501 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 UNC119Q13432 240 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 UTF1Q5T230 341 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 HEPN1Q6WQI6 88 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 GAPTQ8N292 157 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 OR6M1Q8NGM8 313 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 OR13A1Q8NGR1 328 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 SPATA3Q8NHX4 192 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 BARHL1Q9BZE3 327 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 SELENOIQ9C0D9 397 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 KCNK15Q9H427 330 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 ING3Q9NXR8 418 aa14.38□□□□□ -0.11
VPS52-214ENST00000463486 TRGV10A0A0A0MS01 117 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 TMEM14DPA8MWL7 114 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 SLC17A2O00624 439 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 CRTAPO75718 401 aaPredicted RBP14.37□□□□□ -0.11
VPS52-214ENST00000463486 IGHV4-59P01825 116 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 COX7A1P24310 79 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 FGF9P31371 208 aaPredicted RBP14.37□□□□□ -0.11
VPS52-214ENST00000463486 SLC35E4Q6ICL7 350 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 TMEM86BQ8N661 226 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 ZDHHC16Q969W1 377 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 FAM46BQ96A09 425 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 SLITRK2Q9H156 845 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 ZNRD1Q9P1U0 126 aa14.37□□□□□ -0.11
VPS52-214ENST00000463486 SESN1Q9Y6P5 492 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms