RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 KISS1Q15726 138 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 Q6P435 159 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 UNQ9370/PRO34162Q6UXP9 181 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 OR10AC1Q8NH08 325 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 HAVCR2Q8TDQ0 301 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 CHPT1Q8WUD6 406 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 TSEN15Q8WW01 171 aaKnown RBP12.24□□□□□ -0.45
SKA3-204ENST00000462482 COQ2Q96H96 371 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 NR1H4Q96RI1 486 aaPredicted RBP12.24□□□□□ -0.45
SKA3-204ENST00000462482 GPER1Q99527 375 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 CALYQ9NYX4 217 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 DHDHQ9UQ10 334 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 MYRFQ9Y2G1 1151 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 OR4C45A6NMZ5 311 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 SERPINE3A8MV23 424 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 J3QR06 171 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 HSPB6O14558 160 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 AMY1AP04745 511 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 AMY2AP04746 511 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
SKA3-204ENST00000462482 CCDC159P0C7I6 412 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 TMEM11P17152 192 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 SLC6A1P30531 599 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 RAB7AP51149 207 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 SNRPGP62308 76 aaKnown RBP12.23□□□□□ -0.45
SKA3-204ENST00000462482 CD69Q07108 199 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 MRPL28Q13084 256 aaKnown RBP12.23□□□□□ -0.45
SKA3-204ENST00000462482 C17orf58Q2M2W7 97 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 SLC25A30Q5SVS4 291 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 ZNF691Q5VV52 312 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 OR51T1Q8NGJ9 327 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 OR10X1Q8NGY0 326 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 OR56B4Q8NH76 319 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
SKA3-204ENST00000462482 PELI1Q96FA3 418 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 PPIL3Q9H2H8 161 aaKnown RBP12.23□□□□□ -0.45
SKA3-204ENST00000462482 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 IDI2-AS1Q9NZ38 188 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 KIF25Q9UIL4 384 aa12.23□□□□□ -0.45
SKA3-204ENST00000462482 TMEM212A6NML5 194 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 IL1AP01583 271 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 HOXD3P31249 432 aaPredicted RBP12.22□□□□□ -0.45
SKA3-204ENST00000462482 KCNJ3P48549 501 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 RPL23AP62750 156 aaKnown RBP12.22□□□□□ -0.45
SKA3-204ENST00000462482 C10orf99Q6UWK7 81 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 ZNF329Q86UD4 541 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 FOXRED2Q8IWF2 684 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 MRPL41Q8IXM3 137 aaKnown RBP12.22□□□□□ -0.45
SKA3-204ENST00000462482 OR8H3Q8N146 312 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 DRAM1Q8N682 238 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 LINC00482Q8N8I6 264 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 OR5AK2Q8NH90 309 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 ALG8Q9BVK2 526 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 FAM118AQ9NWS6 357 aa12.22□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A18PA6NE21 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A16PA6NEW6 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A20PA6NIJ5 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A9PA6NNJ1 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A12PA8MX19 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A5PA8MXJ8 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 J3QRE1 110 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FGF16O43320 207 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FADS2O95864 444 aaKnown RBP12.21□□□□□ -0.45
SKA3-204ENST00000462482 IGHV3-7P01780 117 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A15PP0C7V4 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A13PP0C7W8 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A14PP0C7W9 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM90A24PP0C7X0 464 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 RAB3AP20336 220 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 GNG10P50151 68 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
SKA3-204ENST00000462482 KRTAP10-11P60412 298 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 GALEQ14376 348 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 HNF4GQ14541 408 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 IL13RA2Q14627 380 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 CDK5R1Q15078 307 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 RSU1Q15404 277 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 LTC4SQ16873 150 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 LPCAT4Q643R3 524 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 ELP2Q6IA86 826 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 LHFPL3Q86UP9 236 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 SATL1Q86VE3 508 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 SYS1Q8N2H4 156 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 PXT1Q8NFP0 134 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 OR10A7Q8NGE5 316 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 OR13A1Q8NGR1 328 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 CNIH3Q8TBE1 160 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 Q96MT0 163 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 PSG11Q9UQ72 335 aa12.21□□□□□ -0.45
SKA3-204ENST00000462482 EXOGQ9Y2C4 368 aaKnown RBP12.21□□□□□ -0.45
SKA3-204ENST00000462482 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms