RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SNCAP37840 140 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 P2RY1P47900 373 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 IL13RA2Q14627 380 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 RSU1Q15404 277 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 OR8B8Q15620 311 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 SWI5Q1ZZU3 235 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 OR8U1Q8NH10 309 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 ERGIC1Q969X5 290 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 MSI2Q96DH6 328 aaKnown RBP10.69□□□□□ -0.7
COL4A6-204ENST00000461897 CMSS1Q9BQ75 279 aaKnown RBP10.69□□□□□ -0.7
COL4A6-204ENST00000461897 FAAP24Q9BTP7 215 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 PRSS50Q9UI38 385 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 A0A1B0GW64 132 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 HTR5AP47898 357 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 PCBD1P61457 104 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 FOXRED2Q8IWF2 684 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 HPSE2Q8WWQ2 592 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 RTN4IP1Q8WWV3 396 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 REEP6Q96HR9 211 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 GMPPAQ96IJ6 420 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 LHX6Q9UPM6 363 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 STRAPQ9Y3F4 350 aaKnown RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 LSM5Q9Y4Y9 91 aaKnown RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 A0A096LPE4 126 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 A0A1W2PPZ6 126 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF503-AS2A6NEH8 195 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 SS18L1O75177 396 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 OR5AC1P0C628 307 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 DUSP1P28562 367 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 EIF2S3P41091 472 aaKnown RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 RBP2P50120 134 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 HABP2Q14520 560 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-204ENST00000461897 GUSBP1Q15486 140 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 TAF9Q16594 264 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 P4HA3Q7Z4N8 544 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 SARAFQ96BY9 339 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 TRIB1Q96RU8 372 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 C12orf57Q99622 126 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 C11orf1Q9H5F2 150 aa10.68□□□□□ -0.7
COL4A6-204ENST00000461897 CACNA1GO43497 2377 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 IL18BPO95998 194 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
COL4A6-204ENST00000461897 MEOX2P50222 304 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 RAB5BP61020 215 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 B2MP61769 119 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 ABCA11PQ4W5N1 156 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 TMEM211Q6ICI0 200 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 GCNT2Q8N0V5 402 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 LGI3Q8N145 548 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 CPEB3Q8NE35 698 aaKnown RBP10.67□□□□□ -0.7
COL4A6-204ENST00000461897 OR10AD1Q8NGE0 317 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 MARS2Q96GW9 593 aaKnown RBP10.67□□□□□ -0.7
COL4A6-204ENST00000461897 DOCK7Q96N67 2140 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 SYT3Q9BQG1 590 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 RSRP1Q9BUV0 290 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 WFDC1Q9HC57 220 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 SLC2A9Q9NRM0 540 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 LUZP4Q9P127 313 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 TMED3Q9Y3Q3 217 aa10.67□□□□□ -0.7
COL4A6-204ENST00000461897 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF850A8MQ14 1090 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 DLL1O00548 723 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ANGPTL7O43827 346 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 TSPAN15O95858 294 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 HLA-HP01893 362 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 PTAFRP25105 342 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 OPRM1P35372 400 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ID4P47928 161 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 AKR1D1P51857 326 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 FBXW9Q5XUX1 488 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 Q6ZS49 121 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 OSR2Q8N2R0 312 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 Q8NFD4 153 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 OR4D5Q8NGN0 318 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SECTM1Q8WVN6 248 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 BORCS8Q96FH0 119 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 BSCL2Q96G97 398 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-204ENST00000461897 AKR1E2Q96JD6 320 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SMDT1Q9H4I9 107 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 IFT22Q9H7X7 185 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF286AQ9HBT8 521 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ZDHHC8Q9ULC8 765 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 hCG_38984A0A1B0GV85 526 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 MKRN2OSH3BPM6 223 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 AGPAT2O15120 278 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 ST8SIA3O43173 380 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SPRY1O43609 319 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-204ENST00000461897 PDCD6O75340 191 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 NRASP01111 189 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 MT-ND4LP03901 98 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 KCNJ3P48549 501 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 FUT6P51993 359 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SRPXP78539 464 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms