RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ATXN7L3Q14CW9 347 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 MOGAT2Q3SYC2 334 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 RSBN1Q5VWQ0 802 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 RAB12Q6IQ22 244 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 PPP1R35Q8TAP8 253 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 URM1Q9BTM9 101 aaKnown RBP9.29□□□□□ -0.92
SSBP1-202ENST00000461433 MRI1Q9BV20 369 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 OPN4Q9UHM6 478 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
SSBP1-202ENST00000461433 TLN2Q9Y4G6 2542 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 A0A0G2JMP0 313 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 A0A0X1KG70 313 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 MEX3AA1L020 520 aaKnown RBP9.28□□□□□ -0.92
SSBP1-202ENST00000461433 A8MV72 311 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-202ENST00000461433 RAB27BO00194 218 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 PDCD6O75340 191 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 GLAP06280 429 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 LIPFP07098 398 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 MMP9P14780 707 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 BLVRBP30043 206 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-202ENST00000461433 VEGFCP49767 419 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 DLX6P56179 175 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 P2RX3P56373 397 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 EDDM3BP56851 147 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 ZNF273Q14593 569 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 PLAC9Q5JTB6 97 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 FAHD2BQ6P2I3 314 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-202ENST00000461433 C6orf201Q7Z4U5 140 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 Q8N7P7 452 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 OR4M2Q8NGB6 313 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 SLC25A38Q96DW6 304 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 FAHD2AQ96GK7 314 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 SIRPDQ9H106 197 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 SPACA1Q9HBV2 294 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 KCNS2Q9ULS6 477 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 SPATA2Q9UM82 520 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 KIAA2026Q5HYC2 2103 aa9.28□□□□□ -0.92
SSBP1-202ENST00000461433 DPPA5A6NC42 116 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 MCRIP1C9JLW8 97 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 J3QLI3 93 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 KCNJ3P48549 501 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 RORCP51449 518 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 ARF6P62330 175 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 MEF2CQ06413 473 aaPredicted RBP9.27□□□□□ -0.93
SSBP1-202ENST00000461433 CR1LQ2VPA4 569 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 KRBOX4Q5JUW0 171 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 SLC35E4Q6ICL7 350 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 BTNL3Q6UXE8 466 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 FAM185AQ8N0U4 392 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 GAPTQ8N292 157 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 DYRK2Q92630 601 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 NCOR1P1Q9H4R4 102 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 ING3Q9NXR8 418 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 KIF25Q9UIL4 384 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 HSF4Q9ULV5 492 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 KCNK7Q9Y2U2 307 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 ETV7Q9Y603 341 aa9.27□□□□□ -0.93
SSBP1-202ENST00000461433 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ODAMA1E959 279 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 UBE2QL1A1L167 161 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 CGB3P0DN86 165 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 CGB7P0DN87 165 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 CCL3L1P16619 93 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ERVFRD-1P60508 538 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
SSBP1-202ENST00000461433 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 FOXB2Q5VYV0 432 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF497Q6ZNH5 498 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 KIR3DL3Q8N743 410 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 OR56B1Q8NGI3 324 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 OR10R2Q8NGX6 335 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 CORO2AQ92828 525 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ARHGAP5-AS1Q96IT6 56 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 WDFY2Q96P53 400 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 NEDD4LQ96PU5 975 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 PECRQ9BY49 303 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ATG5Q9H1Y0 275 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 TMEM160Q9NX00 188 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 H3BUI4 141 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF701M0R085 212 aaPredicted RBP9.26□□□□□ -0.93
SSBP1-202ENST00000461433 MT-ND4P03905 459 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 ZNF182P17025 639 aaPredicted RBP9.26□□□□□ -0.93
SSBP1-202ENST00000461433 DLX1P56177 255 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 FAM120AOSQ5T036 256 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 OLFML2AQ68BL7 652 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 Q6ZPA2 131 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 C1orf122Q6ZSJ8 110 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 Q6ZTK2 550 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 CMTM4Q8IZR5 234 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 OR13A1Q8NGR1 328 aa9.26□□□□□ -0.93
SSBP1-202ENST00000461433 TBX15Q96SF7 602 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms