RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 CRYABP02511 175 aaKnown RBP17.18■□□□□ 0.34
CCM2-203ENST00000461377 KCNJ3P48549 501 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 C20orf204Q6ZNR8 217 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 LIAT1Q6ZQX7 453 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 OR8G5Q8NG78 346 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 MSI2Q96DH6 328 aaKnown RBP17.18■□□□□ 0.34
CCM2-203ENST00000461377 SLC25A32Q9H2D1 315 aa17.18■□□□□ 0.34
CCM2-203ENST00000461377 PURGQ9UJV8 347 aaKnown RBP17.18■□□□□ 0.34
CCM2-203ENST00000461377 LOC400499M0QZD8 3231 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 ZFHX4Q86UP3 3567 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 OR5H1A6NKK0 313 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 F5H0A9 414 aaPredicted RBP17.17■□□□□ 0.34
CCM2-203ENST00000461377 BET1O15155 118 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 ZNF44P15621 663 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 FAM185AQ8N0U4 392 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 FAM169BQ8N8A8 192 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 OR1S1Q8NH92 325 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 C18orf12Q96KH6 178 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 AQP10Q96PS8 301 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 REG4Q9BYZ8 158 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 BCL2L14Q9BZR8 327 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 TMEM100Q9NV29 134 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 DNAJB11Q9UBS4 358 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 AMDHD2Q9Y303 409 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 IGHV1-18A0A0C4DH31 117 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 MSGN1A6NI15 193 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 CDIPTO14735 213 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 GNRHRP30968 328 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 S100A10P60903 97 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 EIF2S3LQ2VIR3 472 aaKnown RBP17.17■□□□□ 0.34
CCM2-203ENST00000461377 C1orf185Q5T7R7 199 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 PDZD9Q8IXQ8 264 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 GLYATL2Q8WU03 294 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 CNTNAP3BQ96NU0 1288 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 CNTNAP3Q9BZ76 1288 aa17.17■□□□□ 0.34
CCM2-203ENST00000461377 IGHV2OR16-5A0A0B4J2B6 119 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 MLNRO43193 412 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 ACAA1P09110 424 aaPredicted RBP17.16■□□□□ 0.34
CCM2-203ENST00000461377 KITLGP21583 273 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 NUP62P37198 522 aaPredicted RBP17.16■□□□□ 0.34
CCM2-203ENST00000461377 RND3P61587 244 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 LDLRAD3Q86YD5 345 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 FAM219AQ8IW50 185 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 LGI3Q8N145 548 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 ANGPTL6Q8NI99 470 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 STOML3Q8TAV4 291 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 SLX1AQ9BQ83 275 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 TINAGQ9UJW2 476 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 SLC25A15Q9Y619 301 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
CCM2-203ENST00000461377 RIF1Q5UIP0 2472 aaKnown RBP17.16■□□□□ 0.34
CCM2-203ENST00000461377 H7C1Q1 480 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 I3L521 148 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 MDH2P40926 338 aaKnown RBP17.15■□□□□ 0.34
CCM2-203ENST00000461377 HLA-DRB3P79483 266 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 THOC7Q6I9Y2 204 aaKnown RBP17.15■□□□□ 0.34
CCM2-203ENST00000461377 RELL2Q8NC24 303 aaPredicted RBP17.15■□□□□ 0.34
CCM2-203ENST00000461377 TREM2Q9NZC2 230 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.15■□□□□ 0.34
CCM2-203ENST00000461377 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 MPPED1O15442 326 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 OR2H2O95918 312 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 GRPP07492 148 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 ZNF146Q15072 292 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 SHEQ5VZ18 495 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 PCSK4Q6UW60 755 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 LYZL2Q7Z4W2 148 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 RPRMLQ8N4K4 120 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 OR4A4PQ8NGN8 299 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 RBPMSQ93062 196 aaKnown RBP17.15■□□□□ 0.34
CCM2-203ENST00000461377 CABLES2Q9BTV7 478 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 CYTL1Q9NRR1 136 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 SDHAF2Q9NX18 166 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 LUZP4Q9P127 313 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 WASF3Q9UPY6 502 aa17.15■□□□□ 0.34
CCM2-203ENST00000461377 SLC33A1O00400 549 aaPredicted RBP17.14■□□□□ 0.33
CCM2-203ENST00000461377 PHF1O43189 567 aaPredicted RBP17.14■□□□□ 0.33
CCM2-203ENST00000461377 NXPH2O95156 264 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 PAN3Q58A45 887 aaKnown RBP17.14■□□□□ 0.33
CCM2-203ENST00000461377 ZNF565Q8N9K5 539 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 TP53RKQ96S44 253 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 CXXC4Q9H2H0 198 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 HES4Q9HCC6 221 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 PCDHB10Q9UN67 800 aa17.14■□□□□ 0.33
CCM2-203ENST00000461377 GVINP1Q7Z2Y8 2422 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 IGKV1D-13A0A0B4J2D9 117 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 C3orf85A0A1B0GTC6 90 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 SIRPB1O00241 398 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 GPR31O00270 319 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 IGKV1-13P0DP09 117 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 RCC1P18754 421 aaPredicted RBP17.13■□□□□ 0.33
CCM2-203ENST00000461377 TIMP3P35625 211 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 NAAAQ02083 359 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 SPIN3Q5JUX0 258 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 FAM74A1Q5RGS3 127 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 MBNL2Q5VZF2 373 aaKnown RBP17.13■□□□□ 0.33
CCM2-203ENST00000461377 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
CCM2-203ENST00000461377 C1orf174Q8IYL3 243 aa17.13■□□□□ 0.33
CCM2-203ENST00000461377 LHFPL5Q8TAF8 219 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms