RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PPIL3Q9H2H8 161 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 IFT22Q9H7X7 185 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 HEXA-AS1Q9H8Q6 139 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 BEX1Q9HBH7 125 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SSR3Q9UNL2 185 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SOX21Q9Y651 276 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 LINC00312Q9Y6C7 94 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TRGV10A0A0A0MS01 117 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A10PA6NDY2 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A18PA6NE21 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A16PA6NEW6 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A20PA6NIJ5 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A8PA6NJQ4 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A7PA6NKC0 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A22PA8MWA6 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A12PA8MX19 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A5PA8MXJ8 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A23PA8MXZ1 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CRTAPO75718 401 aaPredicted RBP10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR7C1O76099 320 aaPredicted RBP10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A15PP0C7V4 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A13PP0C7W8 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A14PP0C7W9 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM90A24PP0C7X0 464 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MYL9P24844 172 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 HTR2CP28335 458 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 P2RX3P56373 397 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 RPL15P61313 204 aaKnown RBP10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 KRBOX4Q5JUW0 171 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CD200R1LQ6Q8B3 271 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR6M1Q8NGM8 313 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ZNF714Q96N38 554 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PPA2Q9H2U2 334 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 DPAGT1Q9H3H5 408 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SPACA1Q9HBV2 294 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SIRT7Q9NRC8 400 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 STUB1Q9UNE7 303 aa10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 UBE2J1Q9Y385 318 aaPredicted RBP10.84□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TRAV1-2A0A0B4J238 106 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 TRAV24A0A0B4J272 114 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 FAM181BA6NEQ2 426 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 GEMIN2O14893 280 aaKnown RBP10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 RBP4P02753 201 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 MELTFP08582 738 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 CD37P11049 281 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 MGMTP16455 207 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 UBE2E1P51965 193 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 AESQ08117 197 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ZNF273Q14593 569 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 NEDD8Q15843 81 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ATAD3CQ5T2N8 411 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ZNF565Q8N9K5 539 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 DYRK2Q92630 601 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 CORO2AQ92828 525 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 DPCDQ9BVM2 203 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 SELENOIQ9C0D9 397 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 NCOR1P1Q9H4R4 102 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ZNF696Q9H7X3 374 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 OR6C3Q9NZP0 311 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 AK6Q9Y3D8 172 aaKnown RBP10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 MMP24Q9Y5R2 645 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 V9GY05 133 aa10.83□□□□□ -0.68
RAB11FIP3-207ENST00000461009 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 MCRIP1C9JLW8 97 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 SLC17A2O00624 439 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 HSPB6O14558 160 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 SLC22A1O15245 554 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 BPNT1O95861 308 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 PAHP00439 452 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 FBP1P09467 338 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 CCL3L1P16619 93 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 FGF9P31371 208 aaPredicted RBP10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 GLIPR1P48060 266 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 RAG2P55895 527 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 RAB11BQ15907 218 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 TAF9Q16594 264 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 C22orf42Q6IC83 251 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 GDPGP1Q6ZNW5 385 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 PDZD9Q8IXQ8 264 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 TPRX1Q8N7U7 411 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 SUMF2Q8NBJ7 301 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 NEK7Q8TDX7 302 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 GAL3ST2Q9H3Q3 398 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 BANF2Q9H503 90 aa10.82□□□□□ -0.68
RAB11FIP3-207ENST00000461009 A0A1W2PP11 408 aa10.81□□□□□ -0.68
RAB11FIP3-207ENST00000461009 ODAMA1E959 279 aa10.81□□□□□ -0.68
RAB11FIP3-207ENST00000461009 RNASEK-C17orf49H0YIS7 233 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms