RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ST3GAL6Q9Y274 331 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 MINOS1-NBL1R4GNA1 71 aa18.62■□□□□ 0.57
PTPN4-208ENST00000460289 ERICH4A6NGS2 130 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 CDK2P24941 298 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 KCNJ3P48549 501 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 GPR176Q14439 515 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 FAM189A2Q15884 450 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 PIGYQ3MUY2 71 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 NHLRC3Q5JS37 347 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 CDH26Q8IXH8 852 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 OSR2Q8N2R0 312 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 DTX3Q8N9I9 347 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 OR4D6Q8NGJ1 314 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 PIFOQ8TCI5 191 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 CDCA4Q9BXL8 241 aa18.61■□□□□ 0.57
PTPN4-208ENST00000460289 TRAV8-7A0A075B6U6 113 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 TRAV24A0A0B4J272 114 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 A0A1W2PPK0 400 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF729A6NN14 1252 aaPredicted RBP18.6■□□□□ 0.57
PTPN4-208ENST00000460289 MMP23AO75900 390 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 MAPK3P27361 379 aaPredicted RBP18.6■□□□□ 0.57
PTPN4-208ENST00000460289 DOC2BQ14184 412 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 SLC35E4Q6ICL7 350 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 LINC00596Q86U02 117 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 DYNAPQ8N1N2 210 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 ABHD12Q8N2K0 398 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 NKX3-1Q99801 234 aaPredicted RBP18.6■□□□□ 0.57
PTPN4-208ENST00000460289 IFT22Q9H7X7 185 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 TPRKBQ9Y3C4 175 aa18.6■□□□□ 0.57
PTPN4-208ENST00000460289 HSPB6O14558 160 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 HTR1DP28221 377 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 PROK1P58294 105 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 PAX5Q02548 391 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 PRAMEF5Q5TYX0 476 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 BRICD5Q6PL45 260 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 MS4A15Q8N5U1 240 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 NDNFQ8TB73 568 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 ZNF596Q8TC21 504 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 DERL3Q96Q80 235 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 CITED1Q99966 193 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 PPIL3Q9H2H8 161 aaKnown RBP18.59■□□□□ 0.57
PTPN4-208ENST00000460289 FBLN5Q9UBX5 448 aa18.59■□□□□ 0.57
PTPN4-208ENST00000460289 MEIKINA0A087WXM9 373 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 H0YHG0 523 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 OR7C1O76099 320 aaPredicted RBP18.58■□□□□ 0.56
PTPN4-208ENST00000460289 GTF2F2P13984 249 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 SERPINA2P20848 420 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 DYNLT3P51808 116 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 RBM11P57052 281 aaKnown RBP18.58■□□□□ 0.56
PTPN4-208ENST00000460289 PLA1AQ53H76 456 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 LDLRAD2Q5SZI1 272 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 JAGN1Q8N5M9 183 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 OR4C13Q8NGP0 309 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 DPCDQ9BVM2 203 aaPredicted RBP18.58■□□□□ 0.56
PTPN4-208ENST00000460289 PITPNC1Q9UKF7 332 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 HILPDAQ9Y5L2 63 aa18.58■□□□□ 0.56
PTPN4-208ENST00000460289 KBTBD11-OT1A0A1B0GTJ5 212 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MAGEA13PA6NCF6 341 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 H3BUI4 141 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MAS1P04201 325 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MYF6P23409 242 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 GABRA5P31644 462 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 KIR2DS4P43632 304 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 RAB13P51153 203 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 SRSF4Q08170 494 aaKnown RBP18.57■□□□□ 0.56
PTPN4-208ENST00000460289 SPHARQ15513 63 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MPV17LQ2QL34 196 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 SLC22A6Q4U2R8 563 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 SUMF2Q8NBJ7 301 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 OR4P4Q8NGL7 312 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 CREB3L1Q96BA8 519 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 ANKRD60Q9BZ19 345 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 NPFFR1Q9GZQ6 430 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 RANBP3Q9H6Z4 567 aaPredicted RBP18.57■□□□□ 0.56
PTPN4-208ENST00000460289 KIF25Q9UIL4 384 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 TCF19Q9Y242 345 aa18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MRPS28Q9Y2Q9 187 aaKnown RBP18.57■□□□□ 0.56
PTPN4-208ENST00000460289 MEGF11A6BM72 1044 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 TOR1AO14656 332 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 GEMIN2O14893 280 aaKnown RBP18.56■□□□□ 0.56
PTPN4-208ENST00000460289 CGB3P0DN86 165 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 CGB7P0DN87 165 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 CD34P28906 385 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 HSPA13P48723 471 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 PRRX1P54821 245 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 SLC35A2P78381 396 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 C17orf58Q2M2W7 97 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 RSBN1Q5VWQ0 802 aaPredicted RBP18.56■□□□□ 0.56
PTPN4-208ENST00000460289 NKAIN3Q8N8D7 197 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 MUL1Q969V5 352 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 MRPS24Q96EL2 167 aaKnown RBP18.56■□□□□ 0.56
PTPN4-208ENST00000460289 DPM3Q9P2X0 92 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 KIAA2026Q5HYC2 2103 aa18.56■□□□□ 0.56
PTPN4-208ENST00000460289 A0A087X0M5 115 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 A0A1B0GX30 115 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 PIN1P1O15428 100 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 GLP1RP43220 463 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 GPR50Q13585 617 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 MED22Q15528 200 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 ACSM3Q53FZ2 586 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms