RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TRGV8A0A0C4DH27 118 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 ST8SIA5O15466 376 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 ZXDAP98168 799 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 PHYHD1Q5SRE7 291 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
PTPRU-205ENST00000460170 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 RLFQ13129 1914 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 RBFOX3A6NFN3 312 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 NMBP08949 121 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 RAB13P51153 203 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 C17orf78Q8N4C9 275 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 SEC11CQ9BY50 192 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 CHRNA10Q9GZZ6 450 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 RPL36A-HNRNPH2H7BZ11 118 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 ERVH48-1M5A8F1 160 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 TRAF3IP2O43734 574 aaPredicted RBP12.9□□□□□ -0.34
PTPRU-205ENST00000460170 GFRALQ6UXV0 394 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
PTPRU-205ENST00000460170 IGHV1-45A0A0A0MS14 117 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 FGF5P12034 268 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 PSG4Q00888 419 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 FBXO17Q96EF6 278 aa12.9□□□□□ -0.34
PTPRU-205ENST00000460170 SVILO95425 2214 aa12.9□□□□□ -0.35
PTPRU-205ENST00000460170 FABP9Q0Z7S8 132 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 ATP6V1FQ16864 119 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 OR11H4Q8NGC9 324 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 FAM206AQ9NX38 181 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 KIAA1456Q9P272 454 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 NKX2-6A6NCS4 301 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 NDUFB3O43676 98 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 CD200P41217 278 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 RAB7AP51149 207 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
PTPRU-205ENST00000460170 KLF3P57682 345 aaPredicted RBP12.89□□□□□ -0.35
PTPRU-205ENST00000460170 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM18Q96B42 140 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 FCGR3AP08637 254 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 SNRPEP62304 92 aaKnown RBP12.89□□□□□ -0.35
PTPRU-205ENST00000460170 SCGB2A2Q13296 93 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 HIKESHIQ53FT3 197 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 ACY3Q96HD9 319 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 ATP5SQ99766 215 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 SIP14410 1827 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 BMP5P22003 454 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 NAAAQ02083 359 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 LRRC10Q5BKY1 277 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 AQP3Q92482 292 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
PTPRU-205ENST00000460170 TINAGQ9UJW2 476 aa12.89□□□□□ -0.35
PTPRU-205ENST00000460170 MBPP02686 304 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-205ENST00000460170 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 TOLLIPQ9H0E2 274 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 OR2W1Q9Y3N9 320 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 C17orf51A8MQB3 221 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 FBXW9Q5XUX1 488 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 AMDHD2Q9Y303 409 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 TMEM229AB2RXF0 380 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 COX7A2P2O60397 106 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF737O75373 536 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 CA11O75493 328 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 CLN5O75503 358 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 PMELP40967 661 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 STARD6P59095 220 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 HLA-DRB3P79483 266 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 CDRT15L2A8MXV6 281 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 GNG10P50151 68 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-205ENST00000460170 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 CBLN2Q8IUK8 224 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 OR5D13Q8NGL4 314 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 SLC25A22Q9H936 323 aa12.88□□□□□ -0.35
PTPRU-205ENST00000460170 HAND1O96004 215 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-205ENST00000460170 SEC11BP0C7V7 166 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF660Q6AZW8 331 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-205ENST00000460170 SAP25Q8TEE9 199 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 HS3ST3B1Q9Y662 390 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 ZNF154Q13106 437 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 STUMQ69YW2 141 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 OR10G4Q8NGN3 311 aa12.87□□□□□ -0.35
PTPRU-205ENST00000460170 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms