RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 KIAA1456Q9P272 454 aa13.61□□□□□ -0.23
CMTM3-203ENST00000460097 DKKL1Q9UK85 242 aa13.61□□□□□ -0.23
CMTM3-203ENST00000460097 LIPGQ9Y5X9 500 aa13.61□□□□□ -0.23
CMTM3-203ENST00000460097 B4DEV8 164 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 J3QKU1 62 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ETV2O00321 342 aaPredicted RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 IGLV3-1P01715 115 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 HLA-DOBP13765 273 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF17P17021 662 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 GNLYP22749 145 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 APOBEC1P41238 236 aaKnown RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 PKIAP61925 76 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 WIPI1Q5MNZ9 446 aaPredicted RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 POMZP3Q6PJE2 187 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF383Q8NA42 475 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 SEMA6DQ8NFY4 1073 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 OR51T1Q8NGJ9 327 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 OR14L1PQ8NHC6 308 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 MRPL24Q96A35 216 aaKnown RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 C10orf35Q96D05 121 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ST6GALNAC5Q9BVH7 336 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 RELNP78509 3460 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ZIC3O60481 467 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 RPS10P46783 165 aaKnown RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 TMEM187Q14656 261 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 STX12Q86Y82 276 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ZGRF1Q86YA3 2104 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 MAFIPQ8WZ33 124 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 C14orf144Q96I85 54 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ABHD14BQ96IU4 210 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 C20orf24Q9BUV8 137 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 BANF2Q9H503 90 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 NAA60Q9H7X0 242 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 LSM5Q9Y4Y9 91 aaKnown RBP13.6□□□□□ -0.23
CMTM3-203ENST00000460097 NCKAP5O14513 1909 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF407Q9C0G0 2248 aa13.6□□□□□ -0.23
CMTM3-203ENST00000460097 IGKV1D-43A0A0B4J1Z2 117 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF724A8MTY0 619 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF587BE7ETH6 402 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 SDCBPO00560 298 aaPredicted RBP13.59□□□□□ -0.23
CMTM3-203ENST00000460097 AQP7O14520 342 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 KNG1P01042 644 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 PRH1P02810 166 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 HCKP08631 526 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF43P17038 809 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 DTYMKP23919 212 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 DUSP1P28562 367 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 CEACAM6P40199 344 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF266Q14584 549 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ELOBQ15370 118 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 C9orf152Q5JTZ5 239 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 DPPA3Q6W0C5 159 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.59□□□□□ -0.23
CMTM3-203ENST00000460097 SMIM3Q9BZL3 60 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 FREM3P0C091 2139 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 DNAJC13O75165 2243 aa13.59□□□□□ -0.23
CMTM3-203ENST00000460097 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 RBFOX3A6NFN3 312 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 NPIPA2E9PIF3 369 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 NPIPA3F8WFD2 350 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 ST8SIA3O43173 380 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 ZNHIT1O43257 154 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 YIF1AO95070 293 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 PTBP3O95758 552 aaKnown RBP13.58□□□□□ -0.23
CMTM3-203ENST00000460097 RAB4BP61018 213 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 GRB2P62993 217 aaKnown RBP13.58□□□□□ -0.23
CMTM3-203ENST00000460097 FOXRED2Q8IWF2 684 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 OR8B12Q8NGG6 310 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 OR14K1Q8NGZ2 314 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 OR5R1Q8NH85 324 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 RNASE11Q8TAA1 199 aaKnown RBP13.58□□□□□ -0.23
CMTM3-203ENST00000460097 PRR7Q8TB68 274 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 SARAFQ96BY9 339 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF2Q9BSG1 426 aaPredicted RBP13.58□□□□□ -0.23
CMTM3-203ENST00000460097 GPR84Q9NQS5 396 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 VDAC3Q9Y277 283 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 ZNF835Q9Y2P0 537 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 LHFPL6Q9Y693 200 aa13.58□□□□□ -0.23
CMTM3-203ENST00000460097 PCNX3Q9H6A9 2034 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 A0A087WZY1 265 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 HSD17B6O14756 317 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 PPP1R2P9O14990 202 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 GPR37O15354 613 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 WISP1O95388 367 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF41P51814 821 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-203ENST00000460097 UCP3P55916 312 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 ESPL1Q14674 2120 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 SLC22A25Q6T423 547 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 LIAT1Q6ZQX7 453 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 ABHD12BQ7Z5M8 362 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms