RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FAM90A7PA6NKC0 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A22PA8MWA6 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A12PA8MX19 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A5PA8MXJ8 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A23PA8MXZ1 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A15PP0C7V4 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A13PP0C7W8 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A14PP0C7W9 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A24PP0C7X0 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 IGHV1-8P0DP01 117 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 SAA4P35542 130 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 PSMD7P51665 324 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 EMX1Q04741 257 aaPredicted RBP13.19□□□□□ -0.3
CD28-203ENST00000458610 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CD28-203ENST00000458610 PIGYQ3MUY2 71 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 PNKDQ8N490 385 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 DUX5Q96PT3 197 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 DPCDQ9BVM2 203 aaPredicted RBP13.19□□□□□ -0.3
CD28-203ENST00000458610 SESN1Q9Y6P5 492 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 TRAV24A0A0B4J272 114 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 COX7A1P24310 79 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 IER3P46695 156 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 GLIPR1P48060 266 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
CD28-203ENST00000458610 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
CD28-203ENST00000458610 PAX5Q02548 391 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 FOXL1Q12952 345 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 INSL4Q14641 139 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 C1orf100Q5SVJ3 147 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 HCP5Q6MZN7 132 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 ZNF782Q6ZMW2 699 aaPredicted RBP13.18□□□□□ -0.3
CD28-203ENST00000458610 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 LYPD6Q86Y78 171 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 SUMF2Q8NBJ7 301 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
CD28-203ENST00000458610 NKX3-1Q99801 234 aaPredicted RBP13.18□□□□□ -0.3
CD28-203ENST00000458610 MEIKINA0A087WXM9 373 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 ZNF729A6NN14 1252 aaPredicted RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 MCRIP1C9JLW8 97 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 HSPB6O14558 160 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 GEMIN2O14893 280 aaKnown RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 CRTAPO75718 401 aaPredicted RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 CLPXO76031 633 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 GLAP06280 429 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 HKR1P10072 659 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 DLX1P56177 255 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 PRB3Q04118 309 aaPredicted RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 ATXN7L3Q14CW9 347 aaPredicted RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 TAF9Q16594 264 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 AANATQ16613 207 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 HEPN1Q6WQI6 88 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 TMEM91Q6ZNR0 172 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 RTN4RL2Q86UN3 420 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 SPARTQ8N0X7 666 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 OR5R1Q8NH85 324 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 NEK7Q8TDX7 302 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 COQ2Q96H96 371 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 C1orf147Q96MC9 270 aaPredicted RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
CD28-203ENST00000458610 TBL2Q9Y4P3 447 aaKnown RBP13.17□□□□□ -0.3
CD28-203ENST00000458610 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 CCRL2O00421 344 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 ARG1P05089 322 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 CD37P11049 281 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 MGMTP16455 207 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 GZMHP20718 246 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 GALP22466 123 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 HTR2CP28335 458 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 COMPP49747 757 aaPredicted RBP13.16□□□□□ -0.3
CD28-203ENST00000458610 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
CD28-203ENST00000458610 DYNC1I2Q13409 638 aaKnown RBP13.16□□□□□ -0.3
CD28-203ENST00000458610 UBE2UQ5VVX9 321 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 GDPGP1Q6ZNW5 385 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 TCF23Q7RTU1 214 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 OR6M1Q8NGM8 313 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 KCNG3Q8TAE7 436 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 DYRK2Q92630 601 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 MALSU1Q96EH3 234 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 SELENOIQ9C0D9 397 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 TMEM133Q9H2Q1 129 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 TNFRSF19Q9NS68 423 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 ZNRD1Q9P1U0 126 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 KIF25Q9UIL4 384 aa13.16□□□□□ -0.3
CD28-203ENST00000458610 KBTBD11-OT1A0A1B0GTJ5 212 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
CD28-203ENST00000458610 PDCD5O14737 125 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 BPNT1O95861 308 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 CDK2P24941 298 aa13.15□□□□□ -0.3
CD28-203ENST00000458610 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.3
CD28-203ENST00000458610 FABP5Q01469 135 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms