RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CANT1Q8WVQ1 401 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 DNAJC9Q8WXX5 260 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 CCDC124Q96CT7 223 aaKnown RBP11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 RHOVQ96L33 236 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 TBX5Q99593 518 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 OR6C3Q9NZP0 311 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 RYR2Q92736 4967 aa11.28□□□□□ -0.6
UPF3AP2-201ENST00000457924 KBTBD11-OT1A0A1B0GTJ5 212 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 METTL15A6NJ78 407 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 J3QR06 171 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGKV1D-33P01593 117 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGKV1-33P01594 117 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 OCM2P0CE71 109 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 PDZK1IP1Q13113 114 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 AADACL4Q5VUY2 407 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 SSX6Q7RTT6 188 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 COQ2Q96H96 371 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 KIRREL1Q96J84 757 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 STAB2Q8WWQ8 2551 aa11.27□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 LOC107986453A0A1B0GWG9 222 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 AQP12BA6NM10 295 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 AP4M1O00189 453 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 SULT1C4O75897 302 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 KDM4BO94953 1096 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 ATF1P18846 271 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 RAB7AP51149 207 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 ATXN7L3Q14CW9 347 aaPredicted RBP11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 CXorf66Q5JRM2 361 aaPredicted RBP11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 GID4Q8IVV7 300 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 AQP12AQ8IXF9 295 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 OR8H3Q8N146 312 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 HAVCR2Q8TDQ0 301 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 ADAT3Q96EY9 351 aaPredicted RBP11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 NSL1Q96IY1 281 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 RHOFQ9HBH0 211 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 SCOCQ9UIL1 159 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 SMAD5-AS1Q9Y6J3 95 aa11.26□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGKV1-12A0A0C4DH73 117 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 A0A1W2PQL4 384 aaPredicted RBP11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 M0R129 80 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 SLC33A1O00400 549 aaPredicted RBP11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 DEGS1O15121 323 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 FAM107AO95990 144 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGKV1D-12P01611 117 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 IGHV3-7P01780 117 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 OR2T7P0C7T2 308 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 ZNF20P17024 532 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 CDX1P47902 265 aaPredicted RBP11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 GPR50Q13585 617 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 ZNF260Q3ZCT1 412 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 UTS2BQ765I0 119 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 RDH10Q8IZV5 341 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 LEAP2Q969E1 77 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 RFT1Q96AA3 541 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 SPSB1Q96BD6 273 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 OPALINQ96PE5 141 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 RCHY1Q96PM5 261 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
UPF3AP2-201ENST00000457924 TENM2Q9NT68 2774 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 LY86O95711 162 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 LYL1P12980 280 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 C21orf33P30042 268 aaPredicted RBP11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 GLP1RP43220 463 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 GPR12P47775 334 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 GNG10P50151 68 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 EFNB1P98172 346 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 FOXE3Q13461 319 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 Q6P435 159 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 OR5D18Q8NGL1 313 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 IL4I1Q96RQ9 567 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 LIN7CQ9NUP9 197 aaKnown RBP11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 CALYQ9NYX4 217 aa11.24□□□□□ -0.61
UPF3AP2-201ENST00000457924 IDI2-AS1Q9NZ38 188 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms