RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RAB5BP61020 215 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 MRPS34P82930 218 aaKnown RBP10.7□□□□□ -0.7
LINC00959-201ENST00000456581 TMEM187Q14656 261 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 FAM27BQ5VT28 67 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 ABLIM2Q6H8Q1 611 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 FOXL2NBQ6ZUU3 175 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 FBXL14Q8N1E6 418 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 OR10AD1Q8NGE0 317 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 FAM213BQ8TBF2 198 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 SF3B5Q9BWJ5 86 aaKnown RBP10.7□□□□□ -0.7
LINC00959-201ENST00000456581 SLC2A9Q9NRM0 540 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 PARPBPQ9NWS1 579 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 TUBD1Q9UJT1 453 aa10.7□□□□□ -0.7
LINC00959-201ENST00000456581 ACACAQ13085 2346 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 DOCK11Q5JSL3 2073 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 A0A096LPE4 126 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 A0A1W2PPZ6 126 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 PHF1O43189 567 aaPredicted RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 WISP2O76076 250 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 CTSDP07339 412 aaPredicted RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 NBL1P41271 181 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 PLGLB1Q02325 96 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TLE1Q04724 770 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 PDZD11Q5EBL8 140 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 NSUN5P2Q63ZY6 315 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 SLC16A14Q7RTX9 510 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 HPSE2Q8WWQ2 592 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TP53RKQ96S44 253 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TM2D1Q9BX74 207 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 RNF122Q9H9V4 155 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 CALHM2Q9HA72 323 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 APC2O95996 2303 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 FAM24AA6NFZ4 105 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 NUDT19A8MXV4 375 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 NKX2-8O15522 239 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 AGAP20933 346 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 CTSSP25774 331 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 CLDN18P56856 261 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 HIST1H3AP68431 136 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 EIF3IQ13347 325 aaKnown RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 HIST2H3PS2Q5TEC6 136 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 GFI1BQ5VTD9 330 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 HIST2H3AQ71DI3 136 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 SKA3Q8IX90 412 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TUSC5Q8IXB3 177 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 INTS12Q96CB8 462 aaKnown RBP10.69□□□□□ -0.7
LINC00959-201ENST00000456581 FOXB1Q99853 325 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 EGLN1Q9GZT9 426 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TINAGQ9UJW2 476 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 STARD10Q9Y365 291 aa10.69□□□□□ -0.7
LINC00959-201ENST00000456581 TAAR5O14804 337 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 LCATP04180 440 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 CCL2P13500 99 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
LINC00959-201ENST00000456581 SULT1A1P50225 295 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 PSG4Q00888 419 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 RNFT1Q5M7Z0 435 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.68□□□□□ -0.7
LINC00959-201ENST00000456581 C17orf78Q8N4C9 275 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 ZFP62Q8NB50 900 aaPredicted RBP10.68□□□□□ -0.7
LINC00959-201ENST00000456581 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 DEFB127Q9H1M4 99 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 NAA60Q9H7X0 242 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 SLC7A10Q9NS82 523 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 C19orf12Q9NSK7 152 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 UBE2CO00762 179 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 SYNGR3O43761 229 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 FTH1P19P0C7X4 201 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 DANCRP0C864 163 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 WT1P19544 449 aaPredicted RBP10.68□□□□□ -0.7
LINC00959-201ENST00000456581 RAB5AP20339 215 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 NPBWR2P48146 333 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 MEOX1P50221 254 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 PMP22Q01453 160 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 SLC35G3Q8N808 338 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 UBAC2Q8NBM4 344 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 GPR35Q9HC97 309 aa10.68□□□□□ -0.7
LINC00959-201ENST00000456581 CYTIPO60759 359 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 IFNA4P05014 189 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 CRYGSP22914 178 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 HTR5AP47898 357 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 TMEM217Q8N7C4 229 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
LINC00959-201ENST00000456581 FAM212BQ9NTI7 297 aaPredicted RBP10.67□□□□□ -0.7
LINC00959-201ENST00000456581 IL36RNQ9UBH0 155 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 NOSIPQ9Y314 301 aaKnown RBP10.67□□□□□ -0.7
LINC00959-201ENST00000456581 TNRC6AQ8NDV7 1962 aaKnown RBP10.67□□□□□ -0.7
LINC00959-201ENST00000456581 NKX2-6A6NCS4 301 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 ZNF587BE7ETH6 402 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 AADACP22760 399 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 RUNX1Q01196 453 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 IGFBP7Q16270 282 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 CALHM1Q8IU99 346 aa10.67□□□□□ -0.7
LINC00959-201ENST00000456581 C15orf54Q8N8G6 183 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms