RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 HS3ST3A1Q9Y663 406 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PAPPAQ13219 1627 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 A0A1W2PQD3 144 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 NKX2-6A6NCS4 301 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BKO60814 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BJP06899 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ZGLP1P0C6A0 271 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 FAHP16930 419 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF708P17019 499 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BOP23527 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 IL3RAP26951 378 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HTR1DP28221 377 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 OTX2P32243 289 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BBP33778 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BDP58876 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BCP62807 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 SRSF4Q08170 494 aaKnown RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 C1orf61Q13536 156 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST2H2BEQ16778 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF542PQ5EBM4 170 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 C1orf194Q5T5A4 169 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 C6orf201Q7Z4U5 140 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PNKDQ8N490 385 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 BLNKQ8WV28 456 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BHQ93079 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BNQ99877 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BMQ99879 126 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PRSS27Q9BQR3 290 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 NDFIP1Q9BT67 221 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PARLQ9H300 379 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 OBP2BQ9NPH6 170 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 TIMM9Q9Y5J7 89 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 TRBV6-7A0A0A0MS04 114 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 A0A1B0GTH9 108 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 SHISA3A0PJX4 238 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 MYADML2A6NDP7 307 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 CORTO00230 105 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 COX7A2P2O60397 106 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 FAM87AP0C7U9 286 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 DRD1P21728 446 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PPP1CCP36873 323 aaKnown RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 CCR5P51681 352 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM50BP56557 158 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 LINC00596Q86U02 117 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ZNF547Q8IVP9 402 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 OR13G1Q8NGZ3 307 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 GALMQ96C23 342 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 EID2BQ96D98 161 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 MUCL1Q96DR8 90 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 S1PR3Q99500 378 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 EMC6Q9BV81 110 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 SEBOXQ9HB31 216 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 GLRX2Q9NS18 164 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 SLC7A10Q9NS82 523 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 FLRT3Q9NZU0 649 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 LAMTOR2Q9Y2Q5 125 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 CHTOPQ9Y3Y2 248 aaKnown RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 A0A1B0GWJ7 208 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HELTA6NFD8 242 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 PLPP3O14495 311 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 HSPB6O14558 160 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ITGB1BP1O14713 200 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 UPK3AO75631 287 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 KLK2P20151 261 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 KIR3DL2P43630 455 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 GAGE1Q13065 139 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 RIGQ13278 110 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 ANKRD55Q3KP44 614 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 C1orf185Q5T7R7 199 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 AMER3Q8N944 861 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 VN1R2Q8NFZ6 395 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 OR5D13Q8NGL4 314 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 WDYHV1Q96HA8 205 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 MS4A4AQ96JQ5 239 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 MRPL18Q9H0U6 180 aaKnown RBP4.41□□□□□ -1.7
PCDH9-203ENST00000456367 OR6C3Q9NZP0 311 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 IL19Q9UHD0 177 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 CES1P1Q9UKY3 287 aa4.41□□□□□ -1.7
PCDH9-203ENST00000456367 MEX3AA1L020 520 aaKnown RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 BCAT2O15382 392 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TNFSF13O75888 250 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 SAMD13Q5VXD3 122 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM215Q68D42 235 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 PARM1Q6UWI2 310 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 BHLHE23Q8NDY6 225 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 STXBP6Q8NFX7 210 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 OR10S1Q8NGN2 331 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 Q8WTZ3 238 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 ADTRPQ96IZ2 230 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 POM121L2Q96KW2 1035 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 MSL2Q9HCI7 577 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 ARFGEF1Q9Y6D6 1849 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TRAV39A0A0B4J263 110 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 MED19A0JLT2 244 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM30CPA0ZSE6 113 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms