RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SEM1Q6ZVN7 128 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 OR2Z1Q8NG97 314 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 NAA60Q9H7X0 242 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 WNT9BO14905 357 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 CRYAAP02489 173 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 RLN2P04090 185 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
CLK3-203ENST00000454830 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 WDR86Q86TI4 376 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 RNASE11Q8TAA1 199 aaKnown RBP11.63□□□□□ -0.55
CLK3-203ENST00000454830 BCL2L14Q9BZR8 327 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 Q9N2K0 584 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 OR2F2O95006 317 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 CNOT4O95628 575 aaKnown RBP11.62□□□□□ -0.55
CLK3-203ENST00000454830 TFF1P04155 84 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 COX5AP20674 150 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 GNRHRP30968 328 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 OR2F1Q13607 317 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 RGS7BPQ6MZT1 257 aaPredicted RBP11.62□□□□□ -0.55
CLK3-203ENST00000454830 KIRREL1Q96J84 757 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 PKIBQ9C010 78 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 KCNS2Q9ULS6 477 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 ATRXP46100 2492 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 TRAV24A0A0B4J272 114 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A10PA6NDY2 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A18PA6NE21 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A16PA6NEW6 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A20PA6NIJ5 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A8PA6NJQ4 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A7PA6NKC0 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A22PA8MWA6 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A12PA8MX19 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A5PA8MXJ8 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A23PA8MXZ1 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 GFRA3O60609 400 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 OR2H2O95918 312 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A15PP0C7V4 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A13PP0C7W8 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A14PP0C7W9 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM90A24PP0C7X0 464 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 OR5AC2Q9NZP5 309 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 CRYM-AS1A6NIL9 109 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 CEACAM18A8MTB9 384 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 SH2D1BO14796 132 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 DHRS11Q6UWP2 260 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 Q6ZPA2 131 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 SLC38A6Q8IZM9 456 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 OR10J5Q8NHC4 309 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
CLK3-203ENST00000454830 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 TRDCB7Z8K6 153 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 ZNF660Q6AZW8 331 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 SPERTQ8NA61 448 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 C1orf162Q8NEQ5 155 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 OR8G5Q8NG78 346 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 SCARB1Q8WTV0 552 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 NMES1Q9C002 83 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 NCOR2Q9Y618 2525 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 PET100P0DJ07 73 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 GUSBP1Q15486 140 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 CLLU1Q5K131 121 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 ZNF474Q6S9Z5 364 aaPredicted RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 OR51H1Q8NH63 302 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 MOB3AQ96BX8 217 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 DBX1A6NMT0 343 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 RPS2P15880 293 aaKnown RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 HLA-GP17693 338 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 ZNF695Q8IW36 515 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 PIK3IP1Q96FE7 263 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 ESRP2Q9H6T0 727 aaKnown RBP11.61□□□□□ -0.55
CLK3-203ENST00000454830 CCL28Q9NRJ3 127 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 PFDN2Q9UHV9 154 aa11.61□□□□□ -0.55
CLK3-203ENST00000454830 CHD8Q9HCK8 2581 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 IQCF6A8MYZ5 107 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 LEUTXA8MZ59 168 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 J3QW42 95 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 NXPH3O95157 252 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 CMTM1Q8IZ96 169 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 GAPTQ8N292 157 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 ARPC5LQ9BPX5 153 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms