RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 BCL6BQ8N143 479 aaPredicted RBP22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 KCNG3Q8TAE7 436 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 YIPF6Q96EC8 236 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 CHCHD6Q9BRQ6 235 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 MS4A7Q9GZW8 240 aaPredicted RBP22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 MEX3AA1L020 520 aaKnown RBP22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 RNASEK-C17orf49H0YIS7 233 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 MPIG6BO95866 241 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 ZNF728P0DKX0 622 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 CFPP27918 469 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 UNC119Q13432 240 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 P2RY14Q15391 338 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 BRD3OSQ6XYD6 125 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 CORO2AQ92828 525 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 ZNF714Q96N38 554 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 KCNK15Q9H427 330 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 NCOR1P1Q9H4R4 102 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 OCEL1Q9H607 264 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 SPACA1Q9HBV2 294 aa22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 RCC2Q9P258 522 aaKnown RBP22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 UBE2J1Q9Y385 318 aaPredicted RBP22.92■■□□□ 1.26
SMARCC1-203ENST00000454240 IGHV1-69DA0A0B4J2H0 117 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 hCG_1809904A0A1W2PP81 198 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 A0A1W2PPE2 198 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 A0A1W2PR64 198 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 A0A1W2PRV1 198 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 ODAMA1E959 279 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 IGHV1-69P01742 117 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 RBP4P02753 201 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 ARSBP15848 533 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 ERVFRD-1P60508 538 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 PRB3Q04118 309 aaPredicted RBP22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 ATAD3CQ5T2N8 411 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 NR2C2APQ86WQ0 139 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 PLPPR1Q8TBJ4 325 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 SLC6A7Q99884 636 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 BARHL1Q9BZE3 327 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 STEAP1Q9UHE8 339 aa22.91■■□□□ 1.26
SMARCC1-203ENST00000454240 RANBP1P43487 201 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 CLDN12P56749 244 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 RPS27AP62979 156 aaKnown RBP22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 RSBN1Q5VWQ0 802 aaPredicted RBP22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 RUSC1-AS1Q66K80 236 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 NCR3LG1Q68D85 454 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 SIGIRRQ6IA17 410 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 GDPGP1Q6ZNW5 385 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 OR2W3Q7Z3T1 314 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 TPRA1Q86W33 373 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 OR51D1Q8NGF3 324 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 KCTD7Q96MP8 289 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 TM2D1Q9BX74 207 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 TMEM59Q9BXS4 323 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 ING3Q9NXR8 418 aa22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 SOX21Q9Y651 276 aaPredicted RBP22.9■■□□□ 1.26
SMARCC1-203ENST00000454240 LOC100506127A0A0U1RQW1 187 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 IFITM5A6NNB3 132 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 GUCA2AQ02747 115 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 KLRD1Q13241 179 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 HES5Q5TA89 166 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 HCP5Q6MZN7 132 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 BRICD5Q6PL45 260 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 PDZD9Q8IXQ8 264 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 FAM3DQ96BQ1 224 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 CENPOQ9BU64 300 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 RNF167Q9H6Y7 350 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 FBLN5Q9UBX5 448 aa22.89■■□□□ 1.25
SMARCC1-203ENST00000454240 TRGV10A0A0A0MS01 117 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 H3BUI4 141 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 UBE2E1P51965 193 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 C2orf76Q3KRA6 126 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 TIMM50Q3ZCQ8 353 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 SLC35E4Q6ICL7 350 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 RAB12Q6IQ22 244 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 USP43Q70EL4 1123 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 TRAPPC6BQ86SZ2 158 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF418Q8TF45 676 aaPredicted RBP22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 SUCNR1Q9BXA5 334 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 TAS2R3Q9NYW6 316 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 OR6C3Q9NZP0 311 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 KIF25Q9UIL4 384 aa22.88■■□□□ 1.25
SMARCC1-203ENST00000454240 AIPO00170 330 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 LDLRAD4O15165 306 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 TCF21O43680 179 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 GLAP06280 429 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 FUT3P21217 361 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 PIP4P2Q8N4L2 257 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF48Q96MX3 618 aaPredicted RBP22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 PEX16Q9Y5Y5 336 aa22.87■■□□□ 1.25
SMARCC1-203ENST00000454240 MEIKINA0A087WXM9 373 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 A0A0A6YYJ9 748 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 MCRIP1C9JLW8 97 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 PDCD6O75340 191 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 CGB3P0DN86 165 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 CGB7P0DN87 165 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 IGHV1-8P0DP01 117 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 SDC2P34741 201 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 RBM39Q14498 530 aaKnown RBP22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 KRTAP21-3Q3LHN1 58 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 OR13F1Q8NGS4 319 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 MRPS26Q9BYN8 205 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms