RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 EPHA1P21709 976 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF154Q13106 437 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 CEACAM16Q2WEN9 425 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 TMEM56Q96MV1 263 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 FOXB1Q99853 325 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 PARPBPQ9NWS1 579 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 ADAMTS20P59510 1910 aa13.55□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF816-ZNF321PA0A0X1KG74 233 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 TNFSF12O43508 249 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 CHST1O43916 411 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 RAC3P60763 192 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 RPS18P62269 152 aaKnown RBP13.54□□□□□ -0.24
TRA2B-205ENST00000453386 RPL23AP62750 156 aaKnown RBP13.54□□□□□ -0.24
TRA2B-205ENST00000453386 ICAM4Q14773 271 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 CMTM1Q8IZ96 169 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 GNPNAT1Q96EK6 184 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-205ENST00000453386 OR2H1Q9GZK4 316 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 WNT5BQ9H1J7 359 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 IGHV1-45A0A0A0MS14 117 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 CBR3O75828 277 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 CDX1P47902 265 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-205ENST00000453386 ELOBQ15370 118 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 EXT1Q16394 746 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 C9orf152Q5JTZ5 239 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF610Q8N9Z0 462 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 CPT1CQ8TCG5 803 aa13.54□□□□□ -0.24
TRA2B-205ENST00000453386 TGIF2-C20orf24A0A0A6YYL0 155 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 GJE1A6NN92 205 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 CXCL13O43927 109 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 CCNOP22674 350 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 ERVFRD-1P60508 538 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 OR2B11Q5JQS5 317 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 SLC25A24Q6NUK1 477 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 SF3B5Q9BWJ5 86 aaKnown RBP13.53□□□□□ -0.24
TRA2B-205ENST00000453386 FSCN3Q9NQT6 498 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
TRA2B-205ENST00000453386 IGKV1D-13A0A0B4J2D9 117 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 IFITM10A6NMD0 228 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 H3BP45 60 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 CYB5BO43169 146 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 IGHV3-9P01782 118 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 IGKV1-13P0DP09 117 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 PYY3Q5JQD4 70 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 RPS19BP1Q86WX3 136 aaKnown RBP13.53□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF576Q9H609 170 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF391Q9UJN7 358 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 ZNF732B4DXR9 585 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 RPL36A-HNRNPH2H7BZ11 118 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 BCL3P20749 454 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 TLE4Q04727 773 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 PDZD11Q5EBL8 140 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 PFDN5Q99471 154 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 CCL28Q9NRJ3 127 aa13.53□□□□□ -0.24
TRA2B-205ENST00000453386 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.24
TRA2B-205ENST00000453386 VDAC1P21796 283 aa13.52□□□□□ -0.24
TRA2B-205ENST00000453386 DAZAP2Q15038 168 aaPredicted RBP13.52□□□□□ -0.24
TRA2B-205ENST00000453386 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.24
TRA2B-205ENST00000453386 IMMP1LQ96LU5 166 aa13.52□□□□□ -0.24
TRA2B-205ENST00000453386 SLC22A20A6NK97 555 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.25
TRA2B-205ENST00000453386 UMODP07911 640 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 JMJD7P0C870 316 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 COX6A1P12074 109 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 EDN3P14138 238 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 ZNF506Q5JVG8 444 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 SIGLEC12Q96PQ1 595 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 HS3ST6Q96QI5 342 aa13.52□□□□□ -0.25
TRA2B-205ENST00000453386 HAAOP46952 286 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 ID3Q02535 119 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 SPNS3Q6ZMD2 512 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 THNSL2Q86YJ6 484 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 CLDND2Q8NHS1 167 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 DUSP23Q9BVJ7 150 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 PHF7Q9BWX1 381 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-205ENST00000453386 GNG13Q9P2W3 67 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 DMRT1Q9Y5R6 373 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 A0A087WWC5 75 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 LOC102723996A0A087X1L8 192 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 PCBD1P61457 104 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 BAXQ07812 192 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 CDPF1Q6NVV7 123 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 OR10D4PQ8NGN7 298 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 RBMXL1Q96E39 390 aaKnown RBP13.51□□□□□ -0.25
TRA2B-205ENST00000453386 Q9N2K0 584 aa13.51□□□□□ -0.25
TRA2B-205ENST00000453386 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
TRA2B-205ENST00000453386 A0A0G2JMM0 328 aa13.5□□□□□ -0.25
TRA2B-205ENST00000453386 A0A1W2PPB8 328 aa13.5□□□□□ -0.25
TRA2B-205ENST00000453386 A0A1W2PRS3 328 aa13.5□□□□□ -0.25
TRA2B-205ENST00000453386 KIR3DP1A8MWS1 328 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms