RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 TRAT1Q6PIZ9 186 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 NUFIP2Q7Z417 695 aaKnown RBP6.78□□□□□ -1.32
RIF1-206ENST00000453091 OR52M1Q8NGK5 317 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 TMEM9BQ9NQ34 198 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 IL2RAP01589 272 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 MMP16P51512 607 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 ZNF137PP52743 207 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 CXorf66Q5JRM2 361 aaPredicted RBP6.78□□□□□ -1.32
RIF1-206ENST00000453091 JMJD6Q6NYC1 403 aaPredicted RBP6.78□□□□□ -1.32
RIF1-206ENST00000453091 NOL4LQ96MY1 436 aaPredicted RBP6.78□□□□□ -1.32
RIF1-206ENST00000453091 RASL10BQ96S79 203 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 PILRAQ9UKJ1 303 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 IGKV1D-42A0A075B6H8 117 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 TMEM30CPA0ZSE6 113 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 SYNGR2O43760 224 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 PPYP01298 95 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 IER3P46695 156 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 ZNF766Q5HY98 468 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 KHDC1LQ5JSQ8 128 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 OR4P4Q8NGL7 312 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 MVB12AQ96EY5 273 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 PRSS50Q9UI38 385 aa6.78□□□□□ -1.32
RIF1-206ENST00000453091 ST8SIA5O15466 376 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 CNN1P51911 297 aaKnown RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 MOB3BQ86TA1 216 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 OR4C5Q8NGB2 326 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 SLC26A1Q9H2B4 701 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 KLF13Q9Y2Y9 288 aaPredicted RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 ASAH2BP0C7U1 165 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 SELEP16581 610 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 EGR1P18146 543 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 ZNF385CQ66K41 422 aaPredicted RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 PAM16Q9Y3D7 125 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 TIMM9Q9Y5J7 89 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 TRGV5A0A0B4J1U4 118 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 HOXD4P09016 255 aaPredicted RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 WNT5AP41221 380 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 RNF133Q8WVZ7 376 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 FAM122AQ96E09 287 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 ORM2P19652 201 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 CD200R1LQ6Q8B3 271 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 KISS1RQ969F8 398 aaPredicted RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 TCF21O43680 179 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 COX7A1P24310 79 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 GNB2P62879 340 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 VN1R17PQ8TDU5 208 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 MESP1Q9BRJ9 268 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 TRBV5-5A0A0J9YX44 114 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 C11orf94C9JXX5 98 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
RIF1-206ENST00000453091 OPRK1P41145 380 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 NHLRC3Q5JS37 347 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 DTD1Q8TEA8 209 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 IP6K3Q96PC2 410 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
RIF1-206ENST00000453091 TAS2R45P59539 299 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 GNG3P63215 75 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 OR52L2PQ8NGH6 319 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 SLC25A28Q96A46 364 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 HSD17B10Q99714 261 aaKnown RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 AICDAQ9GZX7 198 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 TECRQ9NZ01 308 aaKnown RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 A0A0G2JK05 382 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 IGHV5-10-1A0A0J9YXX1 117 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 MFNGO00587 321 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 FCGR3AP08637 254 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 SCTP09683 121 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 PRB4P10163 310 aaPredicted RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 GGTLC2Q14390 218 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 Q6ZN92 141 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 TECTBQ96PL2 329 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 CHD4Q14839 1912 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 MPTX1A8MV57 137 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 USF1P22415 310 aaPredicted RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 OTX1P32242 354 aaPredicted RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 RBPJQ06330 500 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 MUC15Q8N387 334 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 OR2H1Q9GZK4 316 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 TAAR3PQ9P1P4 343 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 ZMAT5Q9UDW3 170 aaKnown RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 LY75O60449 1722 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 OR2M3Q8NG83 312 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 FLYWCH2Q96CP2 140 aaKnown RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 PARP11Q9NR21 331 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 IGKV1D-43A0A0B4J1Z2 117 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 LGALS4P56470 323 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 EIF3IQ13347 325 aaKnown RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 SLC23A3Q6PIS1 610 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 HOGA1Q86XE5 327 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 ZNF665Q9H7R5 613 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 AKIRIN1Q9H9L7 192 aaPredicted RBP6.76□□□□□ -1.33
RIF1-206ENST00000453091 FKBP11Q9NYL4 201 aa6.76□□□□□ -1.33
RIF1-206ENST00000453091 CST2P09228 141 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms