RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 GGT1P19440 569 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 MSR1P21757 451 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 LOXP28300 417 aaPredicted RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 ALDH3A1P30838 453 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 BMI1P35226 326 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 NUP62P37198 522 aaPredicted RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 YAP1P46937 504 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SLC25A1P53007 311 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CRISP1P54107 249 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 TGFBR3Q03167 851 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 BSPH1Q075Z2 132 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 QPRTQ15274 297 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 TSC22D1Q15714 1073 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 NRF1Q16656 503 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 TIMM50Q3ZCQ8 353 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR2B11Q5JQS5 317 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 TIMM23BQ5SRD1 257 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 NCMAPQ5T1S8 102 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 C16orf87Q6PH81 154 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 TFAP2EQ6VUC0 442 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 Q6ZT83 130 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 P2RY8Q86VZ1 359 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CMTM1Q8IZ96 169 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 C6orf223Q8N319 242 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CADM2Q8N3J6 435 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RIBC1Q8N443 379 aaPredicted RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 BBS1Q8NFJ9 593 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR5D16Q8NGK9 328 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR4A15Q8NGL6 344 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR9G4Q8NGQ1 327 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR5W2Q8NH69 310 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR5AK3PQ8NH89 298 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF563Q8TA94 476 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SLC7A13Q8TCU3 470 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 RASL10AQ92737 203 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SLC35G5Q96KT7 338 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 FCRL1Q96LA6 429 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 OR7D2Q96RA2 312 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 C1orf50Q9BV19 199 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 REG4Q9BYZ8 158 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 CACYBPQ9HB71 228 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 EXD2Q9NVH0 621 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF581Q9P0T4 197 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 SLC35A3Q9Y2D2 325 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 NOSIPQ9Y314 301 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 N6AMT1Q9Y5N5 214 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 DNAJC15Q9Y5T4 150 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 COMMD3-BMI1R4GMX3 469 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 ARID1AO14497 2285 aa3.23□□□□□ -1.89
LINC00393-202ENST00000452852 HEATR1Q9H583 2144 aaKnown RBP3.23□□□□□ -1.89
LINC00393-202ENST00000452852 FREM1Q5H8C1 2179 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 IGHV1OR15-1A0A075B7D0 117 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF701M0R085 212 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SIRPB1O00241 398 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GPR171O14626 319 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CD5LO43866 347 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SOX15O60248 233 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 EIF4E2O60573 245 aaKnown RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SPAG7O75391 227 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 MRPL33O75394 65 aaKnown RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GCM2O75603 506 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CCNB2O95067 398 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SOD3P08294 240 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CSF3P09919 207 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 UBTFL6P0CB48 400 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 UBCP0CG48 685 aaKnown RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 FOLR2P14207 255 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 PRKACAP17612 351 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 FKBP2P26885 142 aaKnown RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SHC1P29353 583 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SERPINB5P36952 375 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 OR3A4PP47883 348 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CX3CR1P49238 355 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 FABP6P51161 128 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF83P51522 516 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 OR2B6P58173 313 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 HBA1P69905 142 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GNA13Q14344 377 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 TOMM34Q15785 309 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 LRRC36Q1X8D7 754 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 NDUFAF6Q330K2 333 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 ARHGAP11BQ3KRB8 267 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CHRFAM7AQ494W8 412 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 UNQ9370/PRO34162Q6UXP9 181 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 CASP12Q6UXS9 341 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 ZCCHC23Q6ZST2 131 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GDPD3Q7L5L3 318 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 FAM220AQ7Z4H9 259 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 C6orf120Q7Z4R8 191 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 PPP1R27Q86WC6 154 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 RDH10Q8IZV5 341 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 PUSL1Q8N0Z8 303 aaKnown RBP3.22□□□□□ -1.89
LINC00393-202ENST00000452852 KRTCAP2Q8N6L1 136 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 OR52E5Q8NH55 327 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 PIGXQ8TBF5 258 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GPR119Q8TDV5 335 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 GTSF1Q8WW33 167 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms