RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC22A1O15245 554 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 KCNJ3P48549 501 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 KLRD1Q13241 179 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 ATXN7L3Q14CW9 347 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-202ENST00000452372 TAF9Q16594 264 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 KRBOX4Q5JUW0 171 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 SUMF2Q8NBJ7 301 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 TMEM104Q8NE00 496 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 CORO2AQ92828 525 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 GFI1Q99684 422 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 BARHL1Q9BZE3 327 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 NCOR1P1Q9H4R4 102 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 ZNF581Q9P0T4 197 aa16.29■□□□□ 0.2
COL9A3-202ENST00000452372 AK6Q9Y3D8 172 aaKnown RBP16.29■□□□□ 0.2
COL9A3-202ENST00000452372 TRAV1-2A0A0B4J238 106 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 ODAMA1E959 279 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 HSPB6O14558 160 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 CRTAPO75718 401 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-202ENST00000452372 MGMTP16455 207 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 HTR2CP28335 458 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 PSMD7P51665 324 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 PAX5Q02548 391 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 OR6M1Q8NGM8 313 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 DPCDQ9BVM2 203 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-202ENST00000452372 SELENOIQ9C0D9 397 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 CST11Q9H112 138 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 BANF2Q9H503 90 aa16.28■□□□□ 0.2
COL9A3-202ENST00000452372 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 MDFIC2A0A1B0GVS7 189 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A10PA6NDY2 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A18PA6NE21 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A16PA6NEW6 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A20PA6NIJ5 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A8PA6NJQ4 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A7PA6NKC0 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A22PA8MWA6 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A12PA8MX19 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A5PA8MXJ8 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A23PA8MXZ1 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 SLC17A2O00624 439 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 NPFFO15130 113 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A15PP0C7V4 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A13PP0C7W8 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A14PP0C7W9 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 FAM90A24PP0C7X0 464 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 IGHV1-8P0DP01 117 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 BAMBIQ13145 260 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 TRAPPC6BQ86SZ2 158 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 ZDHHC16Q969W1 377 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 SLC25A28Q96A46 364 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 Q96M66 194 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 SPACA1Q9HBV2 294 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 ING3Q9NXR8 418 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 TAS2R3Q9NYW6 316 aa16.27■□□□□ 0.2
COL9A3-202ENST00000452372 TRRAPQ9Y4A5 3859 aa16.27■□□□□ 0.19
COL9A3-202ENST00000452372 A0A087WXM4 84 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 A0A0U1RQK1 487 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 A0A1W2PRD5 423 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 A0A1W2PRF3 423 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 A0A1W2PRM7 423 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 TRIM77I1YAP6 450 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 VSIG8P0DPA2 414 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 NEDD8Q15843 81 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 ATAD3CQ5T2N8 411 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 RSBN1Q5VWQ0 802 aaPredicted RBP16.26■□□□□ 0.19
COL9A3-202ENST00000452372 ZNF782Q6ZMW2 699 aaPredicted RBP16.26■□□□□ 0.19
COL9A3-202ENST00000452372 PNKDQ8N490 385 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 TSPAN14Q8NG11 270 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 PLPPR1Q8TBJ4 325 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 PLGRKTQ9HBL7 147 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 OR6C3Q9NZP0 311 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 RCC2Q9P258 522 aaKnown RBP16.26■□□□□ 0.19
COL9A3-202ENST00000452372 KIF25Q9UIL4 384 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 V9GY05 133 aa16.26■□□□□ 0.19
COL9A3-202ENST00000452372 MEIOCA2RUB1 952 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 H3BUI4 141 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 PDCD5O14737 125 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 BPNT1O95861 308 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 FGF9P31371 208 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-202ENST00000452372 SAA4P35542 130 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 MIDNQ504T8 468 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 C22orf42Q6IC83 251 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 Q6YL49 198 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 ZNF565Q8N9K5 539 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 OR13D1Q8NGV5 346 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 KCNG3Q8TAE7 436 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 GCDHQ92947 438 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-202ENST00000452372 FAM46BQ96A09 425 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 GAL3ST2Q9H3Q3 398 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 STUB1Q9UNE7 303 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 FAM96BQ9Y3D0 163 aa16.25■□□□□ 0.19
COL9A3-202ENST00000452372 MEIKINA0A087WXM9 373 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 SHISA3A0PJX4 238 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 DNAJC9-AS1A6NH13 148 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 CLDN34H7C241 214 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 CLPXO76031 633 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 MPIG6BO95866 241 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 CGB3P0DN86 165 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms