RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SUMF2Q8NBJ7 301 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 C22orf15Q8WYQ4 148 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 JMJD8Q96S16 334 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-203ENST00000450867 CST11Q9H112 138 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 TAS2R3Q9NYW6 316 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF581Q9P0T4 197 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 FBLN5Q9UBX5 448 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 STUB1Q9UNE7 303 aa11.74□□□□□ -0.53
COL3A1-203ENST00000450867 TMEM14DPA8MWL7 114 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 H3BUI4 141 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 OR7C1O76099 320 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 VENTXO95231 258 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 CGB3P0DN86 165 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 CGB7P0DN87 165 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 VSIG8P0DPA2 414 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 JUNBP17275 347 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 RANBP1P43487 201 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 GLIPR1P48060 266 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 ERVFRD-1P60508 538 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 NEDD8Q15843 81 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 TAF9Q16594 264 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 RSBN1Q5VWQ0 802 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 OR2W3Q7Z3T1 314 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 GAPTQ8N292 157 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 ZDHHC22Q8N966 263 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 KCNG3Q8TAE7 436 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 HEXA-AS1Q9H8Q6 139 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 ZMAT3Q9HA38 289 aaKnown RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
COL3A1-203ENST00000450867 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 AK6Q9Y3D8 172 aaKnown RBP11.73□□□□□ -0.53
COL3A1-203ENST00000450867 TRGV10A0A0A0MS01 117 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 CLDN34H7C241 214 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 PDCD5O14737 125 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 CRTAPO75718 401 aaPredicted RBP11.72□□□□□ -0.53
COL3A1-203ENST00000450867 CLPXO76031 633 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 DLX1P56177 255 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 RPS27AP62979 156 aaKnown RBP11.72□□□□□ -0.53
COL3A1-203ENST00000450867 KLRD1Q13241 179 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 UNC119Q13432 240 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 MIDNQ504T8 468 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 KRBOX4Q5JUW0 171 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 SIGIRRQ6IA17 410 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 C22orf42Q6IC83 251 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 SLC35E4Q6ICL7 350 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 LDLRAD3Q86YD5 345 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 TM2D1Q9BX74 207 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 BARHL1Q9BZE3 327 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 SELENOIQ9C0D9 397 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 BANF2Q9H503 90 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
COL3A1-203ENST00000450867 V9GY05 133 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 TENM1Q9UKZ4 2725 aa11.72□□□□□ -0.53
COL3A1-203ENST00000450867 ZNF729A6NN14 1252 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-203ENST00000450867 ODF3BA8MYP8 253 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 NPFFO15130 113 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 LDLRAD4O15165 306 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 MYL9P24844 172 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 HEPN1Q6WQI6 88 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 TMEM59Q9BXS4 323 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 PLGRKTQ9HBL7 147 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 VCX3AQ9NNX9 186 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 KIF25Q9UIL4 384 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 SSR3Q9UNL2 185 aa11.71□□□□□ -0.53
COL3A1-203ENST00000450867 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 IFITM5A6NNB3 132 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 PDCD6O75340 191 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 CA11O75493 328 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 MPIG6BO95866 241 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 RAB3BP20337 219 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 FUT3P21217 361 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 CD34P28906 385 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 SAA4P35542 130 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 RBM39Q14498 530 aaKnown RBP11.7□□□□□ -0.54
COL3A1-203ENST00000450867 RAB11BQ15907 218 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 ZNF626Q68DY1 528 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 RAB12Q6IQ22 244 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 RBMS3Q6XE24 437 aaKnown RBP11.7□□□□□ -0.54
COL3A1-203ENST00000450867 Q6YL49 198 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 ZNF497Q6ZNH5 498 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 GDPGP1Q6ZNW5 385 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 TPRA1Q86W33 373 aa11.7□□□□□ -0.54
COL3A1-203ENST00000450867 NR2C2APQ86WQ0 139 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms