RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SLCO4C1Q6ZQN7 724 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 BHLHA15Q7RTS1 189 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TCF23Q7RTU1 214 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR8I2Q8N0Y5 310 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 D2HGDHQ8N465 521 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PLPP7Q8NBV4 271 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR11H1Q8NG94 326 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR11H2Q8NH07 326 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR52N5Q8NH56 324 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR51E1Q8TCB6 317 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM40Q8WWA1 233 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NEIL2Q969S2 332 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 GPX7Q96SL4 187 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 GNB1LQ9BYB4 327 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PARP12Q9H0J9 701 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 IL36BQ9NZH7 164 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MRPL27Q9P0M9 148 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 B3GAT1Q9P2W7 334 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TAF1P21675 1872 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MIA3Q5JRA6 1907 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 KCNE1BA0A087WTH5 132 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IGKV6D-21A0A0A0MT36 114 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 A0A0U1RQV5 110 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 UBE2L5PA0A1B0GUS4 154 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 A6NNC1 897 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 H3BRM9 83 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SDCBPO00560 298 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LMX1BO60663 402 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 WISP3O95389 354 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 CLDN7O95471 211 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IL4P05112 153 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FBXO45P0C2W1 286 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CT45A10P0DMU9 189 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ACRP10323 421 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FCGR2AP12318 317 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 GNB3P16520 340 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 LMO2P25791 158 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ACVRL1P37023 503 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CLDN15P56746 228 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR1D5P58170 312 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FAM189BP81408 668 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TIAL1Q01085 375 aaKnown RBP eCLIP1.95□□□□□ -2.1
USP53-202ENST00000450251 TAF10Q12962 218 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TWIST1Q15672 202 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZNF750Q32MQ0 723 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 Q56UQ5 140 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 YOD1Q5VVQ6 348 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 FBXW9Q5XUX1 488 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 GDF6Q6KF10 455 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TRNP1Q6NT89 227 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MFSD12Q6NUT3 480 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TEX43Q6ZNM6 134 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ANKRD37Q7Z713 158 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C1orf174Q8IYL3 243 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MORN4Q8NDC4 146 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR2K2Q8NGT1 345 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CLDND2Q8NHS1 167 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 AQP3Q92482 292 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 DIO2Q92813 273 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TM4SF18Q96CE8 201 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PELI1Q96FA3 418 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C4orf45Q96LM5 186 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FER1L6-AS2Q96M78 137 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PDCD1LG2Q9BQ51 273 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 COMMD5Q9GZQ3 224 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 AKIRIN1Q9H9L7 192 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 BARX1Q9HBU1 254 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LYRM4Q9HD34 91 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 LHX9Q9NQ69 397 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 G6PC2Q9NQR9 355 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SPANXB1Q9NS25 103 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TAAR2Q9P1P5 351 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SIGLEC7Q9Y286 467 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 LY96Q9Y6Y9 160 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZFC3H1O60293 1989 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 ADAMTSL1Q8N6G6 1762 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IGKV6-21A0A0C4DH24 114 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 IGHV2-70DA0A0C4DH43 119 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZNF816-ZNF321PA0A0X1KG74 233 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SERINC4A6NH21 518 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FBLL1A6NHQ2 334 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 CRYM-AS1A6NIL9 109 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 F8W1H4 67 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 K7EP34 96 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TNFSF11O14788 317 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TNFSF12O43508 249 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 RAMP1O60894 148 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 FCN3O75636 299 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NPSP0C0P6 89 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CPMP14384 443 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SSTR5P35346 364 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CAPZBP47756 277 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SPINT3P49223 89 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CYB561P49447 251 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MFAP4P55083 255 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MEF2CQ06413 473 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 CXCL9Q07325 125 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 GAGE5Q13069 117 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms