RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ACTG2P63267 376 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 EFNB3Q15768 340 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 DMRTC1Q5HYR2 192 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 OR2B11Q5JQS5 317 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 MBNL2Q5VZF2 373 aaKnown RBP8.37□□□□□ -1.07
CCDC171-203ENST00000449575 C11orf87Q6NUJ2 197 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 DNM1P46Q6ZS02 220 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 RNF141Q8WVD5 230 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 SMIM19Q96E16 107 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 PGAM5Q96HS1 289 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
CCDC171-203ENST00000449575 PBOV1Q9GZY1 135 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 UQCC1Q9NVA1 299 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 GGT3PA6NGU5 568 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 OR2AT4A6NND4 320 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 IGHV3-13P01766 116 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 SELLP14151 372 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 GCH1P30793 250 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 KIR3DL2P43630 455 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 MMP16P51512 607 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 RPS23P62266 143 aaKnown RBP8.37□□□□□ -1.07
CCDC171-203ENST00000449575 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 WDR38Q5JTN6 314 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 FBXW12Q6X9E4 464 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 DVL3Q92997 716 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-203ENST00000449575 SLC25A38Q96DW6 304 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 REEP6Q96HR9 211 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 R4GMQ9 66 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 TANC2Q9HCD6 1990 aa8.37□□□□□ -1.07
CCDC171-203ENST00000449575 TRBV23-1A0A0A0MS06 115 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 OR5H14A6NHG9 310 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 B9A039 149 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 H0YL77 283 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 MELTFP08582 738 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SRMP19623 302 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 ACKR3P25106 362 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 TAS2R20P59543 309 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 FAM3AP98173 230 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 CDK5R1Q15078 307 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 RPL22L1Q6P5R6 122 aaKnown RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SYS1Q8N2H4 156 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 ZNF565Q8N9K5 539 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 OR51E1Q8TCB6 317 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SLC25A28Q96A46 364 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 PERPQ96FX8 193 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 PPP1R14DQ9NXH3 145 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 OR52A1Q9UKL2 312 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 FLNAP21333 2647 aaKnown RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 IGHV3-64DA0A0J9YX35 117 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 DBX1A6NMT0 343 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 F5H0A9 414 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 H7C417 338 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 TIMM8AO60220 97 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 LMX1BO60663 402 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 TPT1P13693 172 aaKnown RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 MAGEB1P43366 347 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 RAB5CP51148 216 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SCAND1P57086 179 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SSBP1Q04837 148 aaKnown RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 PJVKQ0ZLH3 352 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 ODF1Q14990 250 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 NKPD1Q17RQ9 610 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 PCGF3Q3KNV8 242 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 FAAP20Q6NZ36 180 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 CATSPERDQ86XM0 798 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 TGIF2LYQ8IUE0 185 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 INO80EQ8NBZ0 244 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 OR5L1Q8NGL2 311 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 GCDHQ92947 438 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 DERL3Q96Q80 235 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 NUDT16L1Q9BRJ7 211 aaKnown RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 SLITRK2Q9H156 845 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 MYOZ1Q9NP98 299 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-203ENST00000449575 GPR84Q9NQS5 396 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 TMEM100Q9NV29 134 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 MTFP1Q9UDX5 166 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 V9GY05 133 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 ACANP16112 2415 aa8.36□□□□□ -1.07
CCDC171-203ENST00000449575 hCG_38984A0A1B0GV85 526 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 P2RY10O00398 339 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 TXNL1O43396 289 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 RPS2P15880 293 aaKnown RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 SELEP16581 610 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 RCC1P18754 421 aaPredicted RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 GPX4P36969 197 aaPredicted RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 AKR1C2P52895 323 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 MRPL21Q7Z2W9 205 aaKnown RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 BOLLQ8N9W6 283 aaKnown RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR10AD1Q8NGE0 317 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR56B2PQ8NGI1 322 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR4C16Q8NGL9 310 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR13C5Q8NGS8 318 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms